Parental gene:

NT5C3A, ENSG00000122643

Aliases:NT5C3A, NT5C3, P5'N-1, P5N-1, PN-I, POMP, PSN1, UMPH, UMPH1, cN-III, hUMP1, p36
Description:5'-nucleotidase, cytosolic IIIA [Source:HGNC Symbol;Acc:17820]
Organism:Human (Homo sapiens)
Coordinates:7:33053741..33102409(-)


>ENSG00000122643
ATGAGGGCCCCGTCCATGGACCGCGCGGCCGTGGCGAGGGTGGGCGCGGTAGCGAGCGCCAGCGTGTGCGCCCTGGTGGC
GGGGGTGGTGCTGGCTCAGTACATATTCACCTTGAAGAGGAAGACGGGGCGGAAGACCAAGATCATCGAGATGATGCCAG
AATTCCAGAAAAGTTCAGTTCGAATCAAGAACCCTACAAGAGTAGAAGAAATTATCTGTGGTCTTATCAAAGGAGGAGCT
GCCAAACTTCAGATAATAACGGACTTTGATATGACACTCAGTAGATTTTCATATAAAGGGAAAAGATGCCCAACATGTCA
TAATATCATTGACAACTGTAAGCTGGTTACAGATGAATGTAGAAAAAAGTTATTGCAACTAAAGGAAAAATATTACGCTA
TTGAAGTTGATCCTGTTCTTACTGTAGAAGAGAAGTACCCTTATATGGTGGAATGGTATACTAAATCACATGGTTTGCTT
GTTCAGCAAGCTTTACCAAAAGCTAAACTTAAAGAAATTGTGGCAGAATCTGACGTTATGCTCAAAGAAGGATATGAGAA
TTTCTTTGATAAGCTCCAACAACATAGCATCCCCGTGTTCATATTTTCGGCTGGAATCGGCGATGTACTAGAGGAAGTTA
TTCGTCAAGCTGGTGTTTATCATCCCAATGTCAAAGTTGTGTCCAATTTTATGGATTTTGATGAAACTGGGGTGCTCAAA
GGATTTAAAGGAGAACTAATTCATGTATTTAACAAACATGATGGTGCCTTGAGGAATACAGAATATTTCAATCAACTAAA
AGACAATAGTAACATAATTCTTCTGGGAGACTCCCAAGGAGACTTAAGAATGGCAGATGGAGTGGCCAATGTTGAGCACA
TTCTGAAAATTGGATATCTAAATGATAGAGTGGATGAGCTTTTAGAAAAGTACATGGACTCTTATGATATTGTTTTAGTA
CAAGATGAATCATTAGAAGTAGCCAACTCTATTTTACAGAAGATTCTATAA

Library Parental gene expression (RPM)
bodymap2_liver 8 .20 RPM
bodymap2_lung 30 .01 RPM
bodymap2_breast 23 .33 RPM
bodymap2_adipose 21 .87 RPM
bodymap2_adrenal 28 .66 RPM
bodymap2_skeletal_muscle 42 .83 RPM
bodymap2_thyroid 34 .35 RPM
bodymap2_prostate 24 .70 RPM
bodymap2_colon 21 .85 RPM
bodymap2_testis 20 .25 RPM
bodymap2_brain 22 .22 RPM
bodymap2_heart 17 .04 RPM
bodymap2_white_blood_cells 54 .61 RPM
bodymap2_lymph_node 26 .02 RPM
bodymap2_ovary 23 .83 RPM
bodymap2_kidney 25 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006624 ortholog_one2one 1 retrogene
retro_amel_875,
Bos taurus ENSBTAG00000016709 ortholog_one2one 1 retrogene
retro_btau_1465,
Canis familiaris ENSCAFG00000003154 ortholog_one2one 1 retrogene
retro_cfam_1295,
Equus caballus ENSECAG00000011777 ortholog_one2one 1 retrogene
retro_ecab_1118,
Gorilla gorilla ENSGGOG00000028164 ortholog_one2one 1 retrogene
retro_ggor_2119,
Mustela putorius furo ENSMPUG00000005546 ortholog_one2one 2 retrogenes
retro_mputfur_1175, retro_mputfur_577,
Pteropus vampyrus ENSPVAG00000013182 ortholog_one2one 2 retrogenes
retro_pvam_148, retro_pvam_706,
Rattus norvegicus ENSRNOG00000005981 ortholog_one2one 1 retrogene
retro_rnor_632,
Sus scrofa ENSSSCG00000022912 ortholog_one2one 1 retrogene
retro_sscr_540,
Ictidomys tridecemlineatus ENSSTOG00000026363 ortholog_one2one 2 retrogenes
retro_itri_1325, retro_itri_682,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3084 95.85 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000122643 retrocopies