Parental gene: | ARPC1B, ENSCAFG00000015081 |
| Aliases: | None |
| Description: | actin related protein 2/3 complex, subunit 1B, 41kDa [Source:HGNC Symbol;Acc:704] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 6:10192600..10198294(-) |
>ENSCAFG00000015081
ATGGCCTACCACAGCTTCCTGGTGGAGCCCATCAGCTGCCACGCCTGGAACAAGGACCGCACCCAGATTGCCATCTGCCC
CAACAACCACGAGGTGCACATCTATGAGAAGAGTGGGGCCAAGTGGGTCAAGGTGCATGAGCTCAAGGAGCACAATGGGC
AGGTGACAGGCATTGACTGGGCCCCTGAGAGTAACCGAATTGTGACCTGTGGCACAGACCGCAATGCCTATGTATGGACG
CTGAAGGGCCGCACATGGAAGCCCACACTAGTCATCCTGCGGATCAACCGGGCTGCCCGCTGTGTGCGCTGGGCCCCCCA
TGAGAACAAGTTTGCTGTGGGAAGTGGCTCCCGTGTCATCTCCATCTGCTATTTTGAGCAGGAAAATGACTGGTGGGTGT
GCAAGCACATCAAGAAGCCCATTCGCTCCACGGTCCTCAGCCTGGACTGGCACCCCAACAATGTGCTCTTGGCCGCGGGC
TCGTGTGACTTCAAGTGCAGGATCTTCTCGGCCTACATCAAGGAGGTGGAGGAGCGGCCAGCACCCACCCCGTGGGGCTC
CAAGATGCCCTTTGGGGAGCTGATGTTTGAGTCTAGCAGTAGCTGTGGCTGGGTGCACGGCGTCTGCTTTTCGGCCAGTG
GTAGCCGCGTGGCCTGGGTCAGCCACGACAGCACCATGTGCCTAGCCGATGCCGACAAGAAAATGGCTGTTGCCACTCTG
GCCTCTGAAACGCTGCCACTGCTGGCCCTGACCTTCATCACAGAAAACAGTCTGGTGGCAGCGGGCCACGACTGTTTTCC
GGTGCTGTTTACCTATGACAGCACCACAGGGACACTGAGTTCTGGTGGGCGGCTGGACGTGCCCAAGCAGAGCTCACAGC
GTGGCCTGACCGCCCGAGAGCGCTTCCAGAACCTGGACAAGAAGGCGAGCTCAGAGGGCAGCGTGGCTTCTGGCTCCGGC
CTGGACTCACTGCATAAGAACAGCGTGAGCCAGATCTCGGTGCTCAGCGGGGGCAAGGCTGAGTGCTCACAGTTCTGCAC
CACAGGAATGGATGGTGGCATGAGCATCTGGGATGTGAAGAGCTTGGAATCAGCCTTGAAGGACCTCAAGATCAAATGA
ATGGCCTACCACAGCTTCCTGGTGGAGCCCATCAGCTGCCACGCCTGGAACAAGGACCGCACCCAGATTGCCATCTGCCC
CAACAACCACGAGGTGCACATCTATGAGAAGAGTGGGGCCAAGTGGGTCAAGGTGCATGAGCTCAAGGAGCACAATGGGC
AGGTGACAGGCATTGACTGGGCCCCTGAGAGTAACCGAATTGTGACCTGTGGCACAGACCGCAATGCCTATGTATGGACG
CTGAAGGGCCGCACATGGAAGCCCACACTAGTCATCCTGCGGATCAACCGGGCTGCCCGCTGTGTGCGCTGGGCCCCCCA
TGAGAACAAGTTTGCTGTGGGAAGTGGCTCCCGTGTCATCTCCATCTGCTATTTTGAGCAGGAAAATGACTGGTGGGTGT
GCAAGCACATCAAGAAGCCCATTCGCTCCACGGTCCTCAGCCTGGACTGGCACCCCAACAATGTGCTCTTGGCCGCGGGC
TCGTGTGACTTCAAGTGCAGGATCTTCTCGGCCTACATCAAGGAGGTGGAGGAGCGGCCAGCACCCACCCCGTGGGGCTC
CAAGATGCCCTTTGGGGAGCTGATGTTTGAGTCTAGCAGTAGCTGTGGCTGGGTGCACGGCGTCTGCTTTTCGGCCAGTG
GTAGCCGCGTGGCCTGGGTCAGCCACGACAGCACCATGTGCCTAGCCGATGCCGACAAGAAAATGGCTGTTGCCACTCTG
GCCTCTGAAACGCTGCCACTGCTGGCCCTGACCTTCATCACAGAAAACAGTCTGGTGGCAGCGGGCCACGACTGTTTTCC
GGTGCTGTTTACCTATGACAGCACCACAGGGACACTGAGTTCTGGTGGGCGGCTGGACGTGCCCAAGCAGAGCTCACAGC
GTGGCCTGACCGCCCGAGAGCGCTTCCAGAACCTGGACAAGAAGGCGAGCTCAGAGGGCAGCGTGGCTTCTGGCTCCGGC
CTGGACTCACTGCATAAGAACAGCGTGAGCCAGATCTCGGTGCTCAGCGGGGGCAAGGCTGAGTGCTCACAGTTCTGCAC
CACAGGAATGGATGGTGGCATGAGCATCTGGGATGTGAAGAGCTTGGAATCAGCCTTGAAGGACCTCAAGATCAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 11 .99 RPM |
| SRP017611_kidney | 631 .98 RPM |
| SRP017611_liver | 16 .82 RPM |
| SRP012049_cerebellum | 60 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000046248 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000015849 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000009924 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013186 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000017424 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000010933 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000016522 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000029622 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000010872 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000000991 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000007625 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1568 | 93.29 | 75.27 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000015081 retrocopies