Parental gene: | ARPC1B, ENSGGOG00000013186 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 7:96793284..96857888(+) |
>ENSGGOG00000013186
ATGGCCTACCACAGCTTCCTGGTGGAGCCCATCAGCTGCCACGCCTGGAACAAGGACCGCACCCAGATTGCCATCTGCCC
CAACAACCATGAGGTACATATCTATGAAAAGAGCGGTGCCAAATGGACCAAGGTGCACGAGCTCAAGGAGCACAACGGGC
AGGTGACAGGCTGGGACCACCGTCCTGAAAGGAGGTGGTGGGTTGGGGGGGGTGGTGCAAGGCAGGGCATGGCCACTCAT
TGTGAAGCATCTACCCACTCTCCGAATAGCATATACATTCATGTCTATTTCTCTTACATTAGAGAGGTCTGGGCTATTGA
GTATACTATCTATGTGAGAAGTCAAGGTTCAAGATATCCAATATCCTTTTTACTACTTAAGGAAACTTCTCCCCTGTGGG
TTTGCAAGCACATCAAGAAGCCCATCCGCTCCACCGTCCTCAGCCTGGACTGGCACCCCAACAATGTGCTGCTGGCTGCC
GGCTCCTGTGACTTCAAGTGCCGGATCTTTTCAGCCTACATCAAGGAGGTGGAGGAACGGCCGGCACCCACCCCGTGGGG
CTCCAAGATGCCCTTTGGGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCTGGGTACATGGCGTCTGCTTCTCAGCCA
GCGGGAGCCGCGTGGCCTGGGTGAGCCACGACAGCACCGTCTGCCTGTCTGATGCCGAAAAGAAGATGGCCGTCGCGACT
CTGGCCTCTGAAACACTACCACTGCTGGCGCTGACCTTCATCACAGACAACAGCCTGGTGGCAGCGGGCCACGACTGCTT
CCCGGTGCTGTTCACCTATGACGCCGCCGCGGGGATGCTGAGCTTCGGCGGGCGGCTGGACGTTCCTAAGCAGAGCTCGC
AGCGTGGCTTGACGGCCCGCGAGCGCTTCCAGAACCTGGACAAGAAGGCGAGCTCCGAGGGTGGCACGGCTGCGGGCGCG
GGCCTGGACTCGCTGCACAAGAACAGCGTCAGCCAGATCTCGGTGCTCAGCGGGGGCAAGGCCAAGTGCTCGCAGTTCTG
CACCACTGGCATGGATGGCGGCATGAGTATCTGGGATGTGAAGAGCTTGGAGTCAGCCTTGAAGGACCTCAAGATCAAAT
GA
ATGGCCTACCACAGCTTCCTGGTGGAGCCCATCAGCTGCCACGCCTGGAACAAGGACCGCACCCAGATTGCCATCTGCCC
CAACAACCATGAGGTACATATCTATGAAAAGAGCGGTGCCAAATGGACCAAGGTGCACGAGCTCAAGGAGCACAACGGGC
AGGTGACAGGCTGGGACCACCGTCCTGAAAGGAGGTGGTGGGTTGGGGGGGGTGGTGCAAGGCAGGGCATGGCCACTCAT
TGTGAAGCATCTACCCACTCTCCGAATAGCATATACATTCATGTCTATTTCTCTTACATTAGAGAGGTCTGGGCTATTGA
GTATACTATCTATGTGAGAAGTCAAGGTTCAAGATATCCAATATCCTTTTTACTACTTAAGGAAACTTCTCCCCTGTGGG
TTTGCAAGCACATCAAGAAGCCCATCCGCTCCACCGTCCTCAGCCTGGACTGGCACCCCAACAATGTGCTGCTGGCTGCC
GGCTCCTGTGACTTCAAGTGCCGGATCTTTTCAGCCTACATCAAGGAGGTGGAGGAACGGCCGGCACCCACCCCGTGGGG
CTCCAAGATGCCCTTTGGGGAACTGATGTTCGAATCCAGCAGTAGCTGCGGCTGGGTACATGGCGTCTGCTTCTCAGCCA
GCGGGAGCCGCGTGGCCTGGGTGAGCCACGACAGCACCGTCTGCCTGTCTGATGCCGAAAAGAAGATGGCCGTCGCGACT
CTGGCCTCTGAAACACTACCACTGCTGGCGCTGACCTTCATCACAGACAACAGCCTGGTGGCAGCGGGCCACGACTGCTT
CCCGGTGCTGTTCACCTATGACGCCGCCGCGGGGATGCTGAGCTTCGGCGGGCGGCTGGACGTTCCTAAGCAGAGCTCGC
AGCGTGGCTTGACGGCCCGCGAGCGCTTCCAGAACCTGGACAAGAAGGCGAGCTCCGAGGGTGGCACGGCTGCGGGCGCG
GGCCTGGACTCGCTGCACAAGAACAGCGTCAGCCAGATCTCGGTGCTCAGCGGGGGCAAGGCCAAGTGCTCGCAGTTCTG
CACCACTGGCATGGATGGCGGCATGAGTATCTGGGATGTGAAGAGCTTGGAGTCAGCCTTGAAGGACCTCAAGATCAAAT
GA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 31 .41 RPM |
| SRP007412_cerebellum | 21 .75 RPM |
| SRP007412_heart | 26 .74 RPM |
| SRP007412_kidney | 50 .05 RPM |
| SRP007412_liver | 46 .77 RPM |
| SRP007412_testis | 30 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000046248 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000015081 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000015849 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000009924 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000017424 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000010933 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000016522 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000029622 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000010872 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000000991 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000007625 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_1337 | 68.73 | 94.62 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1455 | 71.31 | 99.46 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000013186 retrocopies