Parental gene: | Arpc1b, ENSMUSG00000029622 |
| Aliases: | None |
| Description: | actin related protein 2/3 complex, subunit 1B [Source:MGI Symbol;Acc:MGI:1343142] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 5:145114214..145130705(+) |
>ENSMUSG00000029622
ATGGCCTACCACAGCTTCCTGGTGGAGCCCATCAGCTGCCATGCCTGGAACAAGGACCGTACACAGATCGCCATCTGCCC
CAACAACCATGAGGTGCACATCTATGAGAAGAGCGGTGCCAAGTGGAACAAGGTGCACGAGCTGAAGGAGCACAACGGGC
AGGTGACAGGCATCGACTGGGCCCCTGAGAGTAACCGCATTGTGACCTGCGGCACGGACCGCAATGCCTATGTGTGGACG
CTGAAGGGCCGCACGTGGAAGCCCACACTGGTCATCCTCCGGATCAATCGAGCTGCCCGCTGTGTGCGCTGGGCCCCCAA
TGAGAACAAGTTCGCCGTGGGCAGCGGCTCCCGGGTCATTTCCATCTGTTATTTTGAGCAGGAGAATGACTGGTGGGTGT
GCAAACACATAAAAAAGCCCATCCGCTCCACAGTGCTCAGCCTGGACTGGCATCCCAACAACGTGCTCCTGGCAGCAGGC
TCCTGTGACTTCAAGTGCAGGATCTTCTCTGCCTATATCAAGGAGGTGGAAGAACGGCCAGCCCCTACACCGTGGGGCTC
CAAGATGCCCTTTGGGGAGCTGATGTTTGAATCGAGCAGCAGCTGTGGCTGGGTGCATGGGGTCTGCTTCTCGGCCAGTG
GGAGCCGAGTTGCTTGGGTCAGCCATGACAGCACTGTATGCCTGGTAGATGCTGACAAGAAGATGGCCGTGGCAACCCTG
GCCTCTGAGACATTACCACTCCTGGCCGTCACCTTCATCACAGAAAATAGTCTAGTGGCAGCGGGCCACGACTGCTTCCC
GGTGCTGTTTACCTATGACAATGCTGCGGTGACATTGAGCTTCGGTGGCCGGCTGGATGTACCCAAGCAGAGCTCCCAGC
GTGGCATGACAGCCCGAGAGCGCTTCCAGAACCTGGACAAGAAGGCCAGCTCTGAGGGGGGTGCAGCCACTGGGGCCGGC
CTGGATTCACTGCACAAGAACAGTGTCAGCCAAATCTCGGTGCTCAGCGGGGGCAAGGCCAAGTGCTCACAGTTCTGCAC
TACAGGCATGGATGGCGGCATGAGCATCTGGGACGTGAAGAGCCTGGAGTCAGCCTTGAAGGACCTGAAAATCAAATGA
ATGGCCTACCACAGCTTCCTGGTGGAGCCCATCAGCTGCCATGCCTGGAACAAGGACCGTACACAGATCGCCATCTGCCC
CAACAACCATGAGGTGCACATCTATGAGAAGAGCGGTGCCAAGTGGAACAAGGTGCACGAGCTGAAGGAGCACAACGGGC
AGGTGACAGGCATCGACTGGGCCCCTGAGAGTAACCGCATTGTGACCTGCGGCACGGACCGCAATGCCTATGTGTGGACG
CTGAAGGGCCGCACGTGGAAGCCCACACTGGTCATCCTCCGGATCAATCGAGCTGCCCGCTGTGTGCGCTGGGCCCCCAA
TGAGAACAAGTTCGCCGTGGGCAGCGGCTCCCGGGTCATTTCCATCTGTTATTTTGAGCAGGAGAATGACTGGTGGGTGT
GCAAACACATAAAAAAGCCCATCCGCTCCACAGTGCTCAGCCTGGACTGGCATCCCAACAACGTGCTCCTGGCAGCAGGC
TCCTGTGACTTCAAGTGCAGGATCTTCTCTGCCTATATCAAGGAGGTGGAAGAACGGCCAGCCCCTACACCGTGGGGCTC
CAAGATGCCCTTTGGGGAGCTGATGTTTGAATCGAGCAGCAGCTGTGGCTGGGTGCATGGGGTCTGCTTCTCGGCCAGTG
GGAGCCGAGTTGCTTGGGTCAGCCATGACAGCACTGTATGCCTGGTAGATGCTGACAAGAAGATGGCCGTGGCAACCCTG
GCCTCTGAGACATTACCACTCCTGGCCGTCACCTTCATCACAGAAAATAGTCTAGTGGCAGCGGGCCACGACTGCTTCCC
GGTGCTGTTTACCTATGACAATGCTGCGGTGACATTGAGCTTCGGTGGCCGGCTGGATGTACCCAAGCAGAGCTCCCAGC
GTGGCATGACAGCCCGAGAGCGCTTCCAGAACCTGGACAAGAAGGCCAGCTCTGAGGGGGGTGCAGCCACTGGGGCCGGC
CTGGATTCACTGCACAAGAACAGTGTCAGCCAAATCTCGGTGCTCAGCGGGGGCAAGGCCAAGTGCTCACAGTTCTGCAC
TACAGGCATGGATGGCGGCATGAGCATCTGGGACGTGAAGAGCCTGGAGTCAGCCTTGAAGGACCTGAAAATCAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 11 .10 RPM |
| SRP007412_cerebellum | 10 .38 RPM |
| SRP007412_heart | 50 .31 RPM |
| SRP007412_kidney | 52 .03 RPM |
| SRP007412_liver | 39 .60 RPM |
| SRP007412_testis | 25 .02 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000046248 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000015081 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000015849 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000009924 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013186 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000017424 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000010933 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000016522 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000029621 | within_species_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000010872 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000000991 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000007625 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1340 | 83.69 | 75.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_3623 | 97.58 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000029622 retrocopies