Parental gene: | C1GALT1, ENSCHOG00000000225 |
| Aliases: | None |
| Description: | core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 [Source:HGNC Symbol;Acc:24337] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_1675:15266..22501(+) |
>ENSCHOG00000000225
ATGGCCTCTAAATCTTGGCTGAATTTTTTAATCTTCCTCTGTGGATCAGCAATCGGATTTTTTTTATGTTCTCAGCTATT
TAGTATTTTGTTGGAAGAACAAAGTGATACCCAACCTAATATTCTTCATAATGATCCTCATGCTAGACATTCAGATGATA
ATGGACAGAATCATCTAGAAGGACAAATGAACTTCAATGCAGATACTAGCCAACATAAAGATGAGGACACAGACATCGCT
GAAAAACTCTATCAGAAGGTTAAAATTCTTTGCTGGGTTATGACAGGACCTCAAAATTTAGAGAAAAAGGCCAAACACGT
CAAAGCTACATGGGCCCAACGTTGTAATAAAGTTTTGTTTATGAGTTCAGAAGAAAATAAAGACTTTCCTACTGTGGGAT
TGAAAACCAAAGAAGGCAGAGACCAACTATACTGGAAAACAATTAAAGCTTTTCATTATGTTTATGACCATCATTTAGAA
GATGCTGATTGGTTTATGAAAGCAGATGATGATACATATGTCATATTAGACAATTTGAGATGGCTTCTTTCAAAATATGA
CCCTGAAAAACCCATTTACTTTGGGAGAAGATTTAAGCCCTTTGTAAAGCAGGGCTACATGAGTGGAGGAGCAGGATATG
TTTTGAGCAAGGAAGCCTTGAAGAGATTTGTTGATGCATTTAGAACGGACAAATGTACACATAGTTCCTCCATCGAAGAC
TTAGCATTGGGGAGATGCATGGAAATTATGAACGTAGAAGCAGGAGATTCCAGAGATACCACTGGAAAAGAAACTTTTCA
TCCCTTTGTACCAGAACACCACTTAATCAAAGGTTATCTACCCAAAACATTTTGGTACTGGAATTATAACTATTATCCTC
CTGTAGAGGGTCCTGGATGCTGTTCTGATCTTGCAATTTCTTTTCATTATGTTGACCCTCTAACTATGTATGAGTTAGAA
TACCTCGTTTATCATCTTCGCCCATATGGTTATTTATACAGATATCAACCTGCCTTATCTGAGAATAGACTAAGGGAAAT
AACTGAAAAAAATGATGATCCAAAAGTAAAATTAGGAAACCGTTGA
ATGGCCTCTAAATCTTGGCTGAATTTTTTAATCTTCCTCTGTGGATCAGCAATCGGATTTTTTTTATGTTCTCAGCTATT
TAGTATTTTGTTGGAAGAACAAAGTGATACCCAACCTAATATTCTTCATAATGATCCTCATGCTAGACATTCAGATGATA
ATGGACAGAATCATCTAGAAGGACAAATGAACTTCAATGCAGATACTAGCCAACATAAAGATGAGGACACAGACATCGCT
GAAAAACTCTATCAGAAGGTTAAAATTCTTTGCTGGGTTATGACAGGACCTCAAAATTTAGAGAAAAAGGCCAAACACGT
CAAAGCTACATGGGCCCAACGTTGTAATAAAGTTTTGTTTATGAGTTCAGAAGAAAATAAAGACTTTCCTACTGTGGGAT
TGAAAACCAAAGAAGGCAGAGACCAACTATACTGGAAAACAATTAAAGCTTTTCATTATGTTTATGACCATCATTTAGAA
GATGCTGATTGGTTTATGAAAGCAGATGATGATACATATGTCATATTAGACAATTTGAGATGGCTTCTTTCAAAATATGA
CCCTGAAAAACCCATTTACTTTGGGAGAAGATTTAAGCCCTTTGTAAAGCAGGGCTACATGAGTGGAGGAGCAGGATATG
TTTTGAGCAAGGAAGCCTTGAAGAGATTTGTTGATGCATTTAGAACGGACAAATGTACACATAGTTCCTCCATCGAAGAC
TTAGCATTGGGGAGATGCATGGAAATTATGAACGTAGAAGCAGGAGATTCCAGAGATACCACTGGAAAAGAAACTTTTCA
TCCCTTTGTACCAGAACACCACTTAATCAAAGGTTATCTACCCAAAACATTTTGGTACTGGAATTATAACTATTATCCTC
CTGTAGAGGGTCCTGGATGCTGTTCTGATCTTGCAATTTCTTTTCATTATGTTGACCCTCTAACTATGTATGAGTTAGAA
TACCTCGTTTATCATCTTCGCCCATATGGTTATTTATACAGATATCAACCTGCCTTATCTGAGAATAGACTAAGGGAAAT
AACTGAAAAAAATGATGATCCAAAAGTAAAATTAGGAAACCGTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000017353 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000106392 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000000063 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000014789 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016338 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000026002 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012847 | ortholog_one2one | 1 retrogene | |
| Petromyzon marinus | ENSPMAG00000001562 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000018925 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_1782 | 82.04 | 98.34 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_2581 | 76.42 | 99.72 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000000225 retrocopies