Parental gene:

C1GALT1, ENSMMUG00000016338

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:3:119141709..119152205(-)


>ENSMMUG00000016338
ATGGCCTCTAAATCCTGGCTGAATTTTTTAACCTTCCTCTGTGGATCAGCAATAGGATTTCTTTTATGTTCCCAGCTATT
TAGTATTTTGTTGGGAGAACAGGGTGACATCCAGCCTAATGTTCTTCATAATGATCCTCATGCGAGGCATTCAGATGATA
ATGGACAGAATCATCTAGAAGGAGAAATGAACTTCAATGCAGATTCTAGCCAACATAAAGATGAGAACACAGACATCGCT
GAAAACCTCTATCAGAAAGTTAAAATTCTTTGCTGGGTTATGACCGGCCCTCAAAACCTAGAGAAAAAGGCCAAACATGT
CAAAGCTACATGGGCCCAGCGTTGTAACAAAGTGTTGTTTATGAGTTCAGAAGAAAATAAAGACTTCCCTGCTGTGGGAT
TGAAAACCAAAGAAGGCAGAGATCAACTATACTGGAAAACAATTAAAGCTTTTCAGTATGTTCATGAACATTATTTAGAA
GATGCTGATTGGTTTTTGAAAGCAGATGATGACACATATGTCATACTAGACAATTTGAGGTGGCTTCTTTCGAAATACGA
CCCTGAAGAACCCATTTACTTTGGGAGAAGATTTAAGCCCTATGTAAAACAGGGCTACATGAGTGGAGGAGCAGGATATG
TACTAAGCAAAGAAGCCTTGAAAAGATTTGTTGATGCATTTAAAACAGACAAGTGTACACATAGTTCCTCCATTGAAGAC
TTAGCACTGGGGAGATGCATGGAAATTATAAATGTAGAAGCAGGAGATTCCAGAGATACCACTGGAAAAGAAACTTTTCA
TCCCTTTGTGCCAGAACACCATTTAATTAAAGGTTATCTACCTAGAACCTTTTGGTACTGGAATTACAACTATTATCCTC
CTGTAGAGGGTCCTGGTTGCTGTTCTGATCTTGCAGTTTCTTTTCACTATGTTGATTCTACAACTATGTATGAGTTAGAA
TACCTCGTTTATCATCTTCGTCCATATGGTTATTTATACAGATATCAACCTACCTTACCTGAAGATATACTAAAGGAAAT
TAGTCAAGCAAACAAAAAGGAAGATACAAAAGTGAAGTTAGGAAACCCTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 3 .73 RPM
SRP007412_brain 4 .03 RPM
SRP007412_cerebellum 3 .68 RPM
SRP007412_heart 2 .36 RPM
SRP007412_kidney 6 .34 RPM
SRP007412_liver 1 .74 RPM
SRP007412_testis 14 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000225 ortholog_one2one 2 retrogenes
retro_chof_1782, retro_chof_2581,
Dasypus novemcinctus ENSDNOG00000017353 ortholog_one2one 2 retrogenes
retro_dnov_1801, retro_dnov_1905,
Homo sapiens ENSG00000106392 ortholog_one2one 2 retrogenes
retro_hsap_3177, retro_hsap_4065,
Loxodonta africana ENSLAFG00000000063 ortholog_one2one 1 retrogene
retro_lafr_1166,
Myotis lucifugus ENSMLUG00000014789 ortholog_one2one 1 retrogene
retro_mluc_1310,
Oryctolagus cuniculus ENSOCUG00000026002 ortholog_one2many 1 retrogene
retro_ocun_216,
Otolemur garnettii ENSOGAG00000012847 ortholog_one2one 1 retrogene
retro_ogar_855,
Petromyzon marinus ENSPMAG00000001562 ortholog_one2many 1 retrogene
retro_pmar_2,
Pan troglodytes ENSPTRG00000018925 ortholog_one2one 2 retrogenes
retro_ptro_2266, retro_ptro_2755,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2009 85.75 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMMUG00000016338 retrocopies