Parental gene:

C1GALT1 (1 of 4), ENSPMAG00000001562

Aliases:None
Description:core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 [Source:HGNC Symbol;Acc:24337]
Organism:Lamprey (Petromyzon marinus)
Coordinates:GL482557:9329..14372(+)


>ENSPMAG00000001562
ATGATAATCCCGAGGACCAGGGCGTCCTTCTTCAGCCTTGTGTGTGGCGCCAGCGTGGGCTTTGCGCTGAGCTACCTTCT
GCTGGCGGTGTACACGCTGGACCGCACGGAGGAGCGCGAGCGCACGCCCGTGGTTATGCTGCCGAACAACCCTCACGACC
CGCACCCGGAGGGTCGTGCCAGCGACGAAGATGGCAATGCGCCACAGGGGCAGATGAAATTCCACATCCATGACGGCGAT
CACAATGAGGAGGACATGAGCCAGATGCAGGAGCTGCGCCGCCGTGTGCGCGTCCTCTGCTGGGTGATGACGGGCCCCCA
GAACCTAGAGAAGAAGGCGCGCCACTTGCGCGCCACCTGGACCAGGGCCTGCGACAAAGTGCTCTTCATGAGCTCCGAGG
AAGACAAGGATCTCCCCGCCGTGGGGCTGCACACCAAGGAGGGGCGAGACCAGCTCTACTGGAAGACGATCAGGGCCTTC
CAGTACGTGCACGAGCACCACCTTGGCGACGCCGACTGGTTCTTGAAAGCGGACGACGACACCTACGTCATCGTCGACAA
CCTGAGACTGATGCTGAGCAACTACACGCCCGAGCAACCCATCTACTTCGGGCGCCGCTTCAAGCCCTTCGTGAAGCAGG
GCTACATGAGCGGCGGTGCAGGCTACGTGCTCAGCAAGGAGGCGCTCGTCCGCTTCGTAGACGCTTTCGCCAAGGGCAAG
TGCACACACACGAGCTCGGTGGAGGACCTGGCGATCGGCTCGTGCCTCGAGAAGATTGGGGTGGCGGCGGGCGACTCGCG
CGACTCTGCCGCGCGCGACACATTCCACCCGTTTGTGCCTGAGCACCACCTCATCGCCAACTACCTGCCCAAGTCATTCT
GGTACTGGAAATACTGCTTCTACCCAGCAGTGGAGGGCCCACAATGCTGCTCCGACTTCACCATCTCATTCCACTACGTG
AGCCCCACGTGGATGTACATCCTGGAGTACTTTGCCTACCACCTGCGTCCGTATGGCTACAGGTACCGCTTCCAGCCCGT
GCTGTCCAACATCGGGCACAGTAAGGACGTGGCGCTGGCAGAGCCGAAGGACGAGGGCAACTTGAGGCTGCCAGACGTG

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000225 ortholog_one2many 2 retrogenes
retro_chof_1782, retro_chof_2581,
Dasypus novemcinctus ENSDNOG00000017353 ortholog_one2many 2 retrogenes
retro_dnov_1801, retro_dnov_1905,
Homo sapiens ENSG00000106392 ortholog_one2many 2 retrogenes
retro_hsap_3177, retro_hsap_4065,
Loxodonta africana ENSLAFG00000000063 ortholog_one2many 1 retrogene
retro_lafr_1166,
Myotis lucifugus ENSMLUG00000014789 ortholog_one2many 1 retrogene
retro_mluc_1310,
Macaca mulatta ENSMMUG00000016338 ortholog_one2many 1 retrogene
retro_mmul_2009,
Oryctolagus cuniculus ENSOCUG00000026002 ortholog_many2many 1 retrogene
retro_ocun_216,
Otolemur garnettii ENSOGAG00000012847 ortholog_many2many 1 retrogene
retro_ogar_855,
Pan troglodytes ENSPTRG00000018925 ortholog_one2many 2 retrogenes
retro_ptro_2266, retro_ptro_2755,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pmar_2 63.35 67.29
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Download FASTA sequences of all ENSPMAG00000001562 retrocopies