Parental gene: | RPS24, ENSDNOG00000010243 |
| Aliases: | None |
| Description: | ribosomal protein S24 [Source:HGNC Symbol;Acc:10411] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_4278:364052..370686(+) |
>ENSDNOG00000010243
ATGAATGACACTGTAACTATCCGGACCAGGAAGTTCATGACTAACAGACTACTTCAGCGGAAACAAATGGTCATCGATGT
CCTTCATCCTGGGAAGGCAACAGTACCTAAGACAGAAATTCGGGAAAAACTAGCCAAAATGTATAAGACCACACCTGATG
TCATCTTTGTATTTGGATTCAGAACCCATTTTGGTGGCGGCAAGACAACTGGCTTTGGCATGATTTATGATTCCTTGGAT
TATGCAAAGAAAAATGAACCCAAACACAGACTTGCAAGACATGGCCTGTATGAGAAGAAAAAGACCTCAAGAAAACAGCG
AAAAGAACGCAAGAACAGAATGAAGAAAGTCAGGGGGACTGCAAAGGCCAATGTTGGTGCGGGCAAAAAGAAGGAGTAA
ATGAATGACACTGTAACTATCCGGACCAGGAAGTTCATGACTAACAGACTACTTCAGCGGAAACAAATGGTCATCGATGT
CCTTCATCCTGGGAAGGCAACAGTACCTAAGACAGAAATTCGGGAAAAACTAGCCAAAATGTATAAGACCACACCTGATG
TCATCTTTGTATTTGGATTCAGAACCCATTTTGGTGGCGGCAAGACAACTGGCTTTGGCATGATTTATGATTCCTTGGAT
TATGCAAAGAAAAATGAACCCAAACACAGACTTGCAAGACATGGCCTGTATGAGAAGAAAAAGACCTCAAGAAAACAGCG
AAAAGAACGCAAGAACAGAATGAAGAAAGTCAGGGGGACTGCAAAGGCCAATGTTGGTGCGGGCAAAAAGAAGGAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 508 .73 RPM |
| SRP012922_cerebellum | 443 .89 RPM |
| SRP012922_heart | 344 .57 RPM |
| SRP012922_kidney | 493 .11 RPM |
| SRP012922_liver | 210 .38 RPM |
| SRP012922_lung | 749 .27 RPM |
| SRP012922_quadricep_muscle | 541 .93 RPM |
| SRP012922_spleen | 970 .06 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000007481 | ortholog_one2one | 32 retrogenes |
retro_etel_1119, retro_etel_1242, retro_etel_1274, retro_etel_1339, retro_etel_1395, retro_etel_1663, retro_etel_1688, retro_etel_1783, retro_etel_1800, retro_etel_1806, retro_etel_183, retro_etel_1901, retro_etel_1934, retro_etel_1978, retro_etel_1991, retro_etel_2040, retro_etel_2104, retro_etel_223, retro_etel_287, retro_etel_289, retro_etel_369, retro_etel_422, retro_etel_476, retro_etel_503, retro_etel_523, retro_etel_67, retro_etel_744, retro_etel_752, retro_etel_815, retro_etel_904, retro_etel_91, retro_etel_94,
|
| Gadus morhua | ENSGMOG00000012595 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000025091 | ortholog_one2one | 3 retrogenes | |
| Ornithorhynchus anatinus | ENSOANG00000006329 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000008090 | ortholog_one2one | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000010328 | ortholog_one2one | 8 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_73 | 88.68 | 78.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_92 | 80.30 | 98.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_168 | 96.15 | 98.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_288 | 85.82 | 99.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_309 | 96.18 | 99.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dnov_551 | 54.40 | 93.94 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_dnov_782 | 83.85 | 97.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_dnov_1299 | 67.86 | 84.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_dnov_1305 | 84.73 | 98.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_dnov_1394 | 77.17 | 96.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_dnov_1444 | 70.87 | 95.45 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_dnov_1470 | 78.79 | 99.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_dnov_1471 | 72.52 | 97.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_dnov_1889 | 98.45 | 97.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_dnov_1920 | 90.08 | 98.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_dnov_1985 | 67.86 | 84.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_dnov_2074 | 73.88 | 98.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_dnov_2357 | 82.93 | 92.42 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000010243 retrocopies