Parental gene:

ENSETEG00000017341

Aliases:None
Description:None
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:scaffold_287920:4810..12297(-)


>ENSETEG00000017341
ATGCGACGGACAGGCGCGCCCACTCAGCCTGACTCTCGGGGGCGAGGTCGAGCCAGGGGCGGCTGCCCTGGGGGCGAGGC
GACGCCGTCTCTTCCTCCACCTCGCGGCGGACCCCGAGCACTGGAGCCTCAGATGAAAGAGACGATCATGAATCAAGAGA
AACTCGCCAAACTGCAGGCACAAGTGCGCATTGGTGGGAAAGGAACTGCCCGCAGAAAGAAGAAGGTGGTTCACAGAACA
GCCACAGCAGATGACAAAAAACTGCAGTTCTCCTTAAAGAAGCTAGGGGTAAACAATATCTCTGGTATTGAAGAGGTAGT
GAATATGTTTACAAACCAGGGAACAGTGATCCACTTTAACAATCCTAAAGTCCAAGCATCACTGGCTGCGAACACCTTCA
CCATTACCGGCCATGCTGAGACAAAGCAGCTGACAGAGATGCTCCCCAGCATCTTGAACCAGCTGGGCGCAGACAGCCTG
ACTAGCCTAAGGAGACTGGCTGAAGCACTGCCAAAACAATCTGTGGATGGAAAGGCCCCACTTGCTACAGGAGAAGATGA
TGATGATGAGGTTCCAGATCTTGTGGAGAACTTTGATGAGGCATCCAAGAATGAGGCTAACTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010012 possible_ortholog 5 retrogenes
retro_btau_1161, retro_btau_1344, retro_btau_1361, retro_btau_459, retro_btau_551,
Callithrix jacchus ENSCJAG00000016600 possible_ortholog 4 retrogenes
retro_cjac_1454, retro_cjac_1673, retro_cjac_2640, retro_cjac_281,
Ciona savignyi ENSCSAVG00000009653 ortholog_one2many 1 retrogene
retro_csav_25,
Equus caballus ENSECAG00000021629 possible_ortholog 1 retrogene
retro_ecab_200,
Echinops telfairi ENSETEG00000011923 within_species_paralog 11 retrogenes
retro_etel_1017, retro_etel_1167, retro_etel_1207, retro_etel_1409, retro_etel_1990, retro_etel_2113, retro_etel_2203, retro_etel_291, retro_etel_663, retro_etel_804, retro_etel_953,
Gorilla gorilla ENSGGOG00000000166 ortholog_one2one 10 retrogenes
retro_ggor_1082, retro_ggor_1682, retro_ggor_1961, retro_ggor_2054, retro_ggor_2399, retro_ggor_2647, retro_ggor_2667, retro_ggor_548, retro_ggor_81, retro_ggor_946,
Microcebus murinus ENSMICG00000017182 possible_ortholog 3 retrogenes
retro_mmur_1219, retro_mmur_1301, retro_mmur_651,
Monodelphis domestica ENSMODG00000001762 possible_ortholog 3 retrogenes
retro_mdom_189, retro_mdom_454, retro_mdom_931,
Nomascus leucogenys ENSNLEG00000004718 possible_ortholog 9 retrogenes
retro_nleu_1081, retro_nleu_1199, retro_nleu_1284, retro_nleu_1446, retro_nleu_1797, retro_nleu_2526, retro_nleu_451, retro_nleu_496, retro_nleu_734,
Oryctolagus cuniculus ENSOCUG00000024914 ortholog_one2one 6 retrogenes
retro_ocun_1186, retro_ocun_1299, retro_ocun_1364, retro_ocun_446, retro_ocun_857, retro_ocun_916,
Pongo abelii ENSPPYG00000029576 ortholog_one2one 14 retrogenes
retro_pabe_1154, retro_pabe_1477, retro_pabe_180, retro_pabe_1885, retro_pabe_1956, retro_pabe_2207, retro_pabe_2458, retro_pabe_2918, retro_pabe_2919, retro_pabe_2932, retro_pabe_3329, retro_pabe_3484, retro_pabe_558, retro_pabe_649,
Rattus norvegicus ENSRNOG00000016912 ortholog_one2many 9 retrogenes
retro_rnor_187, retro_rnor_194, retro_rnor_2121, retro_rnor_2520, retro_rnor_2990, retro_rnor_2991, retro_rnor_2999, retro_rnor_836, retro_rnor_953,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_405 75.17 69.08
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2. retro_etel_960 91.67 63.77
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3. retro_etel_1216 93.79 85.02
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4. retro_etel_1394 92.44 82.61
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5. retro_etel_1997 82.94 82.13
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Download FASTA sequences of all ENSETEG00000017341 retrocopies