RetrogeneDB ID: | retro_etel_291 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_4808:261085..261397(-) | ||
Located in intron of: | ENSETEG00000017474 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BTF3L4 | ||
Ensembl ID: | ENSETEG00000011923 | ||
Aliases: | None | ||
Description: | basic transcription factor 3-like 4 [Source:HGNC Symbol;Acc:30547] |
Percent Identity: | 73.33 % |
Parental protein coverage: | 66.46 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFN |
MN.EKL...QA.V.IGGK..A.RKKKVVHRTATADD.K...SL.KLAVNN..G.EEVNMI.DDG.V.HFN | |
Retrocopy | MNPEKLTRHQAGVPIGGKDRA-RKKKVVHRTATADDIKCERSL*KLAVNNKSGLEEVNMIQDDGIVLHFN |
Parental | NPKVQASLSANTFAITGHAEAKPITEMLPGILSQL |
NPKVQASLSAN.FAI..HAE.KPIT.MLP..L.QL | |
Retrocopy | NPKVQASLSANVFAISEHAETKPITAMLPEMLRQL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |