RetrogeneDB ID: | retro_etel_1017 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_200832:8435..8913(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BTF3L4 | ||
Ensembl ID: | ENSETEG00000011923 | ||
Aliases: | None | ||
Description: | basic transcription factor 3-like 4 [Source:HGNC Symbol;Acc:30547] |
Percent Identity: | 71.25 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIK-DDGTVI-H |
MNQEKLA.LQAQV.IG.KGTA.R....VHRTAT.DD.KLQ.SL.KL.V..IAGIEE..M.K.D....I.H | |
Retrocopy | MNQEKLAELQAQVQIGDKGTAPRIMNLVHRTATVDDIKLQRSL*KLTVYRIAGIEEISMMKRDETPFI>H |
Parental | FNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDNETPKPEDIDEE |
FN.PKVQA.LSANTFAITGHA.AK..TEM.P.ILSQ..ADS.TSLRK..EQFPRQVLD..TPK.EDIDEE | |
Retrocopy | FNYPKVQAPLSANTFAITGHAKAKLSTEMVPKILSQVVADSFTSLRK*SEQFPRQVLDSKTPKTEDIDEE |
Parental | DDDVXXLVENFDEASKNEAN |
D.DV..L.EN.D..SKNEAN | |
Retrocopy | DNDVPDLIENVDGKSKNEAN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |