Parental gene:

IER3IP1, ENSG00000134049

Aliases:IER3IP1, MEDS, PRO2309
Description:immediate early response 3 interacting protein 1 [Source:HGNC Symbol;Acc:18550]
Organism:Human (Homo sapiens)
Coordinates:18:44681412..44702745(-)


>ENSG00000134049
ATGGCCTTTACCCTGTACTCACTGCTGCAGGCAGCCCTGCTCTGCGTCAACGCCATCGCAGTGCTGCACGAGGAGCGATT
CCTCAAGAACATTGGCTGGGGAACAGACCAGGGAATTGGTGGATTTGGAGAAGAGCCGGGAATTAAATCACAGCTAATGA
ACCTTATTCGATCTGTAAGAACCGTGATGAGAGTGCCATTGATAATAGTAAACTCAATTGCAATTGTGTTACTTTTATTA
TTTGGATGA

Library Parental gene expression (RPM)
bodymap2_liver 30 .57 RPM
bodymap2_lung 33 .07 RPM
bodymap2_breast 32 .92 RPM
bodymap2_adipose 32 .56 RPM
bodymap2_adrenal 32 .71 RPM
bodymap2_skeletal_muscle 22 .41 RPM
bodymap2_thyroid 33 .93 RPM
bodymap2_prostate 33 .29 RPM
bodymap2_colon 41 .63 RPM
bodymap2_testis 53 .79 RPM
bodymap2_brain 29 .84 RPM
bodymap2_heart 24 .61 RPM
bodymap2_white_blood_cells 33 .65 RPM
bodymap2_lymph_node 33 .86 RPM
bodymap2_ovary 33 .60 RPM
bodymap2_kidney 62 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000032961 ortholog_many2many 1 retrogene
retro_btau_13,
Callithrix jacchus ENSCJAG00000004610 ortholog_one2many 1 retrogene
retro_cjac_3333,
Echinops telfairi ENSETEG00000000303 ortholog_one2many 1 retrogene
retro_etel_1526,
Gorilla gorilla ENSGGOG00000027939 ortholog_one2many 1 retrogene
retro_ggor_903,
Mus musculus ENSMUSG00000090000 ortholog_many2many 1 retrogene
retro_mmus_150,
Nomascus leucogenys ENSNLEG00000011450 ortholog_one2many 1 retrogene
retro_nleu_2504,
Otolemur garnettii ENSOGAG00000016626 ortholog_one2many 1 retrogene
retro_ogar_2152,
Pongo abelii ENSPPYG00000009141 ortholog_one2many 3 retrogenes
retro_pabe_2850, retro_pabe_2851, retro_pabe_962,
Pan troglodytes ENSPTRG00000010002 ortholog_one2many 1 retrogene
retro_ptro_791,
Tupaia belangeri ENSTBEG00000001443 ortholog_one2many 4 retrogenes
retro_tbel_1530, retro_tbel_2783, retro_tbel_3343, retro_tbel_3429,
Tursiops truncatus ENSTTRG00000001019 ortholog_one2many 1 retrogene
retro_ttru_1930,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1156 85.37 100.00
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Download FASTA sequences of all ENSG00000134049 retrocopies