Parental gene:

PSAT1, ENSG00000135069

Aliases:PSAT1, EPIP, PSA, PSAT
Description:phosphoserine aminotransferase 1 [Source:HGNC Symbol;Acc:19129]
Organism:Human (Homo sapiens)
Coordinates:9:80912058..80945009(+)


>ENSG00000135069
ATGGACGCCCCCAGGCAGGTGGTCAACTTTGGGCCTGGTCCCGCCAAGCTGCCGCACTCAGTGTTGTTAGAGATACAAAA
GGAATTATTAGACTACAAAGGAGTTGGCATTAGTGTTCTTGAAATGAGTCACAGGTCATCAGATTTTGCCAAGATTATTA
ACAATACAGAGAATCTTGTGCGGGAATTGCTAGCTGTTCCAGACAACTATAAGGTGATTTTTCTGCAAGGAGGTGGGTGC
GGCCAGTTCAGTGCTGTCCCCTTAAACCTCATTGGCTTGAAAGCAGGAAGGTGTGCTGACTATGTGGTGACAGGAGCTTG
GTCAGCTAAGGCCGCAGAAGAAGCCAAGAAGTTTGGGACTATAAATATCGTTCACCCTAAACTTGGGAGTTATACAAAAA
TTCCAGATCCAAGCACCTGGAACCTCAACCCAGATGCCTCCTACGTGTATTATTGCGCAAATGAGACGGTGCATGGTGTG
GAGTTTGACTTTATACCCGATGTCAAGGGAGCAGTACTGGTTTGTGACATGTCCTCAAACTTCCTGTCCAAGCCAGTGGA
TGTTTCCAAGTTTGGTGTGATTTTTGCTGGTGCCCAGAAGAATGTTGGCTCTGCTGGGGTCACCGTGGTGATTGTCCGTG
ATGACCTGCTGGGGTTTGCCCTCCGAGAGTGCCCCTCGGTCCTGGAATACAAGGTGCAGGCTGGAAACAGCTCCTTGTAC
AACACGCCTCCATGTTTCAGCATCTACGTCATGGGCTTGGTTCTGGAGTGGATTAAAAACAATGGAGGTGCCGCGGCCAT
GGAGAAGCTTAGCTCCATCAAATCTCAAACAATTTATGAGATTATTGATAATTCTCAAGGATTCTACGTTTGTCCAGTGG
AGCCCCAAAATAGAAGCAAGATGAATATTCCATTCCGCATTGGCAATGCCAAAGGAGATGATGCTTTAGAAAAAAGATTT
CTTGATAAAGCTCTTGAACTCAATATGTTGTCCTTGAAAGGGCATAGGTCTGTGGGAGGCATCCGGGCCTCTCTGTATAA
TGCTGTCACAATTGAAGACGTTCAGAAGCTGGCCGCCTTCATGAAAAAATTTTTGGAGATGCATCAGCTATGA

Library Parental gene expression (RPM)
bodymap2_liver 128 .94 RPM
bodymap2_lung 1 .81 RPM
bodymap2_breast 10 .74 RPM
bodymap2_adipose 7 .67 RPM
bodymap2_adrenal 15 .05 RPM
bodymap2_skeletal_muscle 0 .00 RPM
bodymap2_thyroid 10 .87 RPM
bodymap2_prostate 8 .28 RPM
bodymap2_colon 3 .42 RPM
bodymap2_testis 19 .34 RPM
bodymap2_brain 165 .49 RPM
bodymap2_heart 0 .42 RPM
bodymap2_white_blood_cells 5 .18 RPM
bodymap2_lymph_node 19 .06 RPM
bodymap2_ovary 49 .72 RPM
bodymap2_kidney 113 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006898 ortholog_one2many 1 retrogene
retro_amel_375,
Bos taurus ENSBTAG00000013960 ortholog_one2one 1 retrogene
retro_btau_1658,
Canis familiaris ENSCAFG00000001570 ortholog_one2one 1 retrogene
retro_cfam_269,
Choloepus hoffmanni ENSCHOG00000003817 ortholog_one2one 1 retrogene
retro_chof_2702,
Callithrix jacchus ENSCJAG00000003319 ortholog_one2many 1 retrogene
retro_cjac_1203,
Echinops telfairi ENSETEG00000004158 ortholog_one2one 1 retrogene
retro_etel_99,
Loxodonta africana ENSLAFG00000017917 ortholog_one2one 2 retrogenes
retro_lafr_1249, retro_lafr_660,
Macaca mulatta ENSMMUG00000011868 ortholog_one2many 2 retrogenes
retro_mmul_1029, retro_mmul_2341,
Mustela putorius furo ENSMPUG00000012566 ortholog_one2one 1 retrogene
retro_mputfur_808,
Nomascus leucogenys ENSNLEG00000002989 ortholog_one2one 3 retrogenes
retro_nleu_1010, retro_nleu_1288, retro_nleu_2805,
Oryctolagus cuniculus ENSOCUG00000007765 ortholog_one2one 1 retrogene
retro_ocun_1092,
Pongo abelii ENSPPYG00000019313 ortholog_one2one 3 retrogenes
retro_pabe_1950, retro_pabe_308, retro_pabe_3328,
Pan troglodytes ENSPTRG00000021045 ortholog_one2one 2 retrogenes
retro_ptro_1606, retro_ptro_316,
Rattus norvegicus ENSRNOG00000013971 ortholog_one2one 1 retrogene
retro_rnor_1663,
Tupaia belangeri ENSTBEG00000012946 ortholog_one2one 1 retrogene
retro_tbel_1577,
Tarsius syrichta ENSTSYG00000000093 ortholog_one2one 2 retrogenes
retro_tsyr_1073, retro_tsyr_1212,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_412 92.55 58.02
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2. retro_hsap_2267 64.96 61.62
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3. retro_hsap_4054 88.67 68.92
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Download FASTA sequences of all ENSG00000135069 retrocopies