Parental gene:

TXN, ENSG00000136810

Aliases:TXN, TRDX, TRX, TRX1
Description:thioredoxin [Source:HGNC Symbol;Acc:12435]
Organism:Human (Homo sapiens)
Coordinates:9:113006090..113018920(-)


>ENSG00000136810
ATGGTGAAGCAGATCGAGAGCAAGACTGCTTTTCAGGAAGCCTTGGACGCTGCAGGTGATAAACTTGTAGTAGTTGACTT
CTCAGCCACGTGGTGTGGGCCTTGCAAAATGATCAAGCCTTTCTTTCATTCCCTCTCTGAAAAGTATTCCAACGTGATAT
TCCTTGAAGTAGATGTGGATGACTGTCAGGATGTTGCTTCAGAGTGTGAAGTCAAATGCATGCCAACATTCCAGTTTTTT
AAGAAGGGACAAAAGGTGGGTGAATTTTCTGGAGCCAATAAGGAAAAGCTTGAAGCCACCATTAATGAATTAGTCTAA

Library Parental gene expression (RPM)
bodymap2_liver 86 .59 RPM
bodymap2_lung 155 .57 RPM
bodymap2_breast 69 .94 RPM
bodymap2_adipose 71 .04 RPM
bodymap2_adrenal 60 .38 RPM
bodymap2_skeletal_muscle 13 .15 RPM
bodymap2_thyroid 57 .59 RPM
bodymap2_prostate 105 .74 RPM
bodymap2_colon 110 .68 RPM
bodymap2_testis 47 .28 RPM
bodymap2_brain 54 .36 RPM
bodymap2_heart 24 .28 RPM
bodymap2_white_blood_cells 58 .89 RPM
bodymap2_lymph_node 67 .10 RPM
bodymap2_ovary 59 .91 RPM
bodymap2_kidney 124 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000013018 ortholog_one2many 3 retrogenes
retro_acar_112, retro_acar_121, retro_acar_122,
Choloepus hoffmanni ENSCHOG00000011506 ortholog_one2one 10 retrogenes
retro_chof_1111, retro_chof_127, retro_chof_1557, retro_chof_1680, retro_chof_1696, retro_chof_240, retro_chof_2424, retro_chof_317, retro_chof_617, retro_chof_82,
Callithrix jacchus ENSCJAG00000017321 ortholog_one2many 5 retrogenes
retro_cjac_1407, retro_cjac_2536, retro_cjac_2733, retro_cjac_3010, retro_cjac_69,
Cavia porcellus ENSCPOG00000015348 ortholog_one2many 5 retrogenes
retro_cpor_1048, retro_cpor_49, retro_cpor_54, retro_cpor_55, retro_cpor_74,
Dasypus novemcinctus ENSDNOG00000019205 ortholog_one2one 20 retrogenes
retro_dnov_100, retro_dnov_1047, retro_dnov_1122, retro_dnov_1222, retro_dnov_1353, retro_dnov_1403, retro_dnov_1404, retro_dnov_1628, retro_dnov_1634, retro_dnov_1646, retro_dnov_1949, retro_dnov_1996, retro_dnov_2069, retro_dnov_2197, retro_dnov_2239, retro_dnov_290, retro_dnov_466, retro_dnov_593, retro_dnov_843, retro_dnov_852,
Echinops telfairi ENSETEG00000003065 ortholog_one2one 13 retrogenes
retro_etel_1173, retro_etel_1256, retro_etel_1672, retro_etel_1725, retro_etel_1807, retro_etel_1831, retro_etel_1932, retro_etel_1956, retro_etel_320, retro_etel_389, retro_etel_737, retro_etel_903, retro_etel_926,
Gorilla gorilla ENSGGOG00000006925 ortholog_one2one 6 retrogenes
retro_ggor_1283, retro_ggor_1769, retro_ggor_2440, retro_ggor_35, retro_ggor_401, retro_ggor_620,
Loxodonta africana ENSLAFG00000012856 ortholog_one2one 2 retrogenes
retro_lafr_372, retro_lafr_93,
Macropus eugenii ENSMEUG00000003515 ortholog_one2many 8 retrogenes
retro_meug_1198, retro_meug_1204, retro_meug_1603, retro_meug_192, retro_meug_2170, retro_meug_2175, retro_meug_539, retro_meug_840,
Microcebus murinus ENSMICG00000002128 ortholog_one2one 2 retrogenes
retro_mmur_118, retro_mmur_717,
Macaca mulatta ENSMMUG00000010322 ortholog_one2many 1 retrogene
retro_mmul_167,
Mus musculus ENSMUSG00000028367 ortholog_one2one 2 retrogenes
retro_mmus_3063, retro_mmus_432,
Otolemur garnettii ENSOGAG00000009165 ortholog_one2one 6 retrogenes
retro_ogar_1573, retro_ogar_2763, retro_ogar_3141, retro_ogar_3205, retro_ogar_727, retro_ogar_851,
Ochotona princeps ENSOPRG00000013805 ortholog_one2one 11 retrogenes
retro_opri_1132, retro_opri_1172, retro_opri_220, retro_opri_309, retro_opri_468, retro_opri_643, retro_opri_681, retro_opri_738, retro_opri_81, retro_opri_887, retro_opri_89,
Procavia capensis ENSPCAG00000014011 ortholog_one2one 1 retrogene
retro_pcap_311,
Pongo abelii ENSPPYG00000019491 ortholog_one2one 2 retrogenes
retro_pabe_1428, retro_pabe_2965,
Pan troglodytes ENSPTRG00000021245 ortholog_one2one 7 retrogenes
retro_ptro_1158, retro_ptro_1703, retro_ptro_1988, retro_ptro_2444, retro_ptro_309, retro_ptro_339, retro_ptro_524,
Rattus norvegicus ENSRNOG00000012081 ortholog_one2one 1 retrogene
retro_rnor_616,
Sarcophilus harrisii ENSSHAG00000006739 ortholog_one2many 1 retrogene
retro_shar_329,
Ictidomys tridecemlineatus ENSSTOG00000020668 possible_ortholog 4 retrogenes
retro_itri_6, retro_itri_714, retro_itri_823, retro_itri_884,
Tupaia belangeri ENSTBEG00000011193 ortholog_one2many 2 retrogenes
retro_tbel_1293, retro_tbel_3405,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_206 65.56 82.86
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2. retro_hsap_405 62.50 60.00
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3. retro_hsap_736 83.33 74.29
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4. retro_hsap_1713 84.91 100.00
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5. retro_hsap_2330 85.87 87.62
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6. retro_hsap_3052 88.46 98.10
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7. retro_hsap_3614 66.67 93.33
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Download FASTA sequences of all ENSG00000136810 retrocopies