RetrogeneDB - Parental gene ENSDNOG00000019205 details

                            
>ENSDNOG00000019205
GATGATTTTCAGGCAGCCTTGAACAGTGCTGGTGATAAACTTGTAGTAGTTGATTTCTCAGCCACATGGTGTGGGCCTTG

TAAGATGATCAAGCCTTTCTTTCATTCCCTCTCTGAAAAATATAGTGCAGTGGTGTTCCTTGAAGTCGATGTGGATGACT

GTCAGGATGTTGCTGCAGACTGTGAAGTCAAATGCATGCCAACATTTCAGTTTTATAAAAAGGGACAAAAGGTGGGTGAA

TTTTCAGGCGCTAATAAGGAAAAGCTTGAAGCCACCATTAATGAATTAAGCTAA

Library	Parental gene expression (RPM)
SRP012922_ascending_colon	132 .43 RPM
SRP012922_cerebellum	39 .73 RPM
SRP012922_heart	51 .28 RPM
SRP012922_kidney	163 .73 RPM
SRP012922_liver	142 .11 RPM
SRP012922_lung	141 .73 RPM
SRP012922_quadricep_muscle	47 .43 RPM
SRP012922_spleen	96 .15 RPM

Species	Parental gene accession	Homology type	Retrogenes number
Anolis carolinensis	ENSACAG00000013018	ortholog_one2one	3 retrogenes	retro_acar_112, retro_acar_121, retro_acar_122,
Ailuropoda melanoleuca	ENSAMEG00000018017	ortholog_one2one	3 retrogenes	retro_amel_1559, retro_amel_211, retro_amel_217,
Bos taurus	ENSBTAG00000002953	ortholog_one2one	2 retrogenes	retro_btau_1267, retro_btau_418,
Choloepus hoffmanni	ENSCHOG00000011506	ortholog_one2one	10 retrogenes	retro_chof_1111, retro_chof_127, retro_chof_1557, retro_chof_1680, retro_chof_1696, retro_chof_240, retro_chof_2424, retro_chof_317, retro_chof_617, retro_chof_82,
Callithrix jacchus	ENSCJAG00000017321	ortholog_one2many	5 retrogenes	retro_cjac_1407, retro_cjac_2536, retro_cjac_2733, retro_cjac_3010, retro_cjac_69,
Cavia porcellus	ENSCPOG00000015348	ortholog_one2many	5 retrogenes	retro_cpor_1048, retro_cpor_49, retro_cpor_54, retro_cpor_55, retro_cpor_74,
Equus caballus	ENSECAG00000013324	ortholog_one2one	1 retrogene	retro_ecab_51,
Echinops telfairi	ENSETEG00000003065	ortholog_one2one	13 retrogenes	retro_etel_1173, retro_etel_1256, retro_etel_1672, retro_etel_1725, retro_etel_1807, retro_etel_1831, retro_etel_1932, retro_etel_1956, retro_etel_320, retro_etel_389, retro_etel_737, retro_etel_903, retro_etel_926,
Felis catus	ENSFCAG00000004790	ortholog_one2one	4 retrogenes	retro_fcat_1096, retro_fcat_1105, retro_fcat_2025, retro_fcat_877,
Homo sapiens	ENSG00000136810	ortholog_one2one	7 retrogenes	retro_hsap_1713, retro_hsap_206, retro_hsap_2330, retro_hsap_3052, retro_hsap_3614, retro_hsap_405, retro_hsap_736,
Gorilla gorilla	ENSGGOG00000006925	ortholog_one2many	6 retrogenes	retro_ggor_1283, retro_ggor_1769, retro_ggor_2440, retro_ggor_35, retro_ggor_401, retro_ggor_620,
Loxodonta africana	ENSLAFG00000012856	ortholog_one2one	2 retrogenes	retro_lafr_372, retro_lafr_93,
Macropus eugenii	ENSMEUG00000003515	ortholog_one2one	8 retrogenes	retro_meug_1198, retro_meug_1204, retro_meug_1603, retro_meug_192, retro_meug_2170, retro_meug_2175, retro_meug_539, retro_meug_840,
Microcebus murinus	ENSMICG00000002128	ortholog_one2one	2 retrogenes	retro_mmur_118, retro_mmur_717,
Myotis lucifugus	ENSMLUG00000009065	ortholog_one2one	3 retrogenes	retro_mluc_1268, retro_mluc_1940, retro_mluc_776,
Macaca mulatta	ENSMMUG00000010322	ortholog_one2many	1 retrogene	retro_mmul_167,
Mustela putorius furo	ENSMPUG00000007426	ortholog_one2one	3 retrogenes	retro_mputfur_1230, retro_mputfur_693, retro_mputfur_840,
Mus musculus	ENSMUSG00000028367	ortholog_one2one	2 retrogenes	retro_mmus_3063, retro_mmus_432,
Otolemur garnettii	ENSOGAG00000009165	ortholog_one2one	6 retrogenes	retro_ogar_1573, retro_ogar_2763, retro_ogar_3141, retro_ogar_3205, retro_ogar_727, retro_ogar_851,
Ochotona princeps	ENSOPRG00000013805	ortholog_one2one	11 retrogenes	retro_opri_1132, retro_opri_1172, retro_opri_220, retro_opri_309, retro_opri_468, retro_opri_643, retro_opri_681, retro_opri_738, retro_opri_81, retro_opri_887, retro_opri_89,
Procavia capensis	ENSPCAG00000014011	ortholog_one2one	1 retrogene	retro_pcap_311,
Pongo abelii	ENSPPYG00000019491	ortholog_one2many	2 retrogenes	retro_pabe_1428, retro_pabe_2965,
Pan troglodytes	ENSPTRG00000021245	ortholog_one2one	7 retrogenes	retro_ptro_1158, retro_ptro_1703, retro_ptro_1988, retro_ptro_2444, retro_ptro_309, retro_ptro_339, retro_ptro_524,
Pteropus vampyrus	ENSPVAG00000007265	ortholog_one2one	1 retrogene	retro_pvam_433,
Rattus norvegicus	ENSRNOG00000012081	ortholog_one2one	1 retrogene	retro_rnor_616,
Sorex araneus	ENSSARG00000007465	ortholog_one2one	2 retrogenes	retro_sara_373, retro_sara_525,
Sarcophilus harrisii	ENSSHAG00000006739	ortholog_one2one	1 retrogene	retro_shar_329,
Sus scrofa	ENSSSCG00000005453	ortholog_one2one	1 retrogene	retro_sscr_786,
Ictidomys tridecemlineatus	ENSSTOG00000020668	ortholog_one2many	4 retrogenes	retro_itri_6, retro_itri_714, retro_itri_823, retro_itri_884,
Tupaia belangeri	ENSTBEG00000011193	ortholog_one2many	2 retrogenes	retro_tbel_1293, retro_tbel_3405,
Tursiops truncatus	ENSTTRG00000000119	ortholog_one2one	1 retrogene	retro_ttru_1378,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_dnov_100	75.26	95.88	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_dnov_290	85.71	79.38	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_dnov_466	88.78	100.00	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_dnov_593	87.63	100.00	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_dnov_843	64.00	77.32	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_dnov_852	88.78	100.00	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_dnov_1047	84.38	98.97	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_dnov_1122	79.38	98.97	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_dnov_1222	65.62	98.97	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_dnov_1353	76.36	55.67	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_dnov_1403	83.51	100.00	Please wait, loading	Please wait, loading	Please wait, loading
12.	retro_dnov_1404	87.50	81.44	Please wait, loading	Please wait, loading	Please wait, loading
13.	retro_dnov_1628	70.00	61.86	Please wait, loading	Please wait, loading	Please wait, loading
14.	retro_dnov_1634	77.32	100.00	Please wait, loading	Please wait, loading	Please wait, loading
15.	retro_dnov_1646	86.60	100.00	Please wait, loading	Please wait, loading	Please wait, loading
16.	retro_dnov_1949	82.47	100.00	Please wait, loading	Please wait, loading	Please wait, loading
17.	retro_dnov_1996	73.27	100.00	Please wait, loading	Please wait, loading	Please wait, loading
18.	retro_dnov_2069	88.75	81.44	Please wait, loading	Please wait, loading	Please wait, loading
19.	retro_dnov_2197	80.41	100.00	Please wait, loading	Please wait, loading	Please wait, loading
20.	retro_dnov_2239	79.38	100.00	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSDNOG00000019205 retrocopies

Parental gene:	TXN, ENSDNOG00000019205
Aliases:	None
Description:	thioredoxin [Source:HGNC Symbol;Acc:12435]
Organism:	*Armadillo (Dasypus novemcinctus)*
Coordinates:	GeneScaffold_3302:223731..230255(+)

Parental gene:

TXN, ENSDNOG00000019205