Parental gene:

PAFAH1B2, ENSG00000168092

Aliases:PAFAH1B2, HEL-S-303
Description:platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) [Source:HGNC Symbol;Acc:8575]
Organism:Human (Homo sapiens)
Coordinates:11:117014982..117047610(+)


>ENSG00000168092
ATGAGCCAAGGAGACTCAAACCCAGCAGCTATTCCGCATGCAGCAGAAGATATTCAAGGAGATGACCGATGGATGTCTCA
GCACAACAGATTTGTTTTGGACTGTAAAGACAAAGAGCCTGATGTACTGTTCGTGGGAGACTCCATGGTGCAGTTAATGC
AGCAATATGAGATATGGCGAGAGCTTTTTTCCCCACTTCATGCACTGAATTTTGGAATTGGGGGAGATACAACAAGACAT
GTTTTGTGGAGACTAAAGAATGGAGAACTGGAGAATATTAAGCCTAAGGTCATTGTTGTCTGGGTAGGAACAAATAACCA
CGAAAATACAGCAGAAGAAGTAGCAGGTGGGATCGAGGCCATTGTACAACTTATCAACACAAGGCAGCCACAGGCCAAAA
TCATTGTATTGGGTTTGTTACCTCGAGGTGAGAAACCCAATCCTTTGAGGCAAAAGAACGCCAAGGTGAACCAACTCCTC
AAGGTTTCGCTGCCGAAGCTTGCCAACGTGCAGCTCCTGGATACCGACGGGGGTTTTGTGCACTCGGACGGTGCCATCTC
CTGCCACGACATGTTTGATTTTCTGCATCTGACAGGAGGGGGCTATGCAAAGATCTGCAAACCCCTGCATGAACTGATCA
TGCAGTTGTTGGAGGAAACACCTGAGGAGAAACAAACCACCATTGCCTGA

Library Parental gene expression (RPM)
bodymap2_liver 48 .61 RPM
bodymap2_lung 112 .96 RPM
bodymap2_breast 128 .62 RPM
bodymap2_adipose 164 .51 RPM
bodymap2_adrenal 108 .02 RPM
bodymap2_skeletal_muscle 54 .73 RPM
bodymap2_thyroid 125 .87 RPM
bodymap2_prostate 101 .25 RPM
bodymap2_colon 97 .51 RPM
bodymap2_testis 204 .57 RPM
bodymap2_brain 188 .39 RPM
bodymap2_heart 66 .81 RPM
bodymap2_white_blood_cells 127 .56 RPM
bodymap2_lymph_node 126 .27 RPM
bodymap2_ovary 163 .37 RPM
bodymap2_kidney 123 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008628 ortholog_one2one 2 retrogenes
retro_amel_1145, retro_amel_818,
Canis familiaris ENSCAFG00000013226 ortholog_one2one 1 retrogene
retro_cfam_1335,
Callithrix jacchus ENSCJAG00000012698 ortholog_one2one 1 retrogene
retro_cjac_3325,
Dipodomys ordii ENSDORG00000011274 ortholog_one2one 1 retrogene
retro_dord_560,
Felis catus ENSFCAG00000029945 ortholog_one2one 1 retrogene
retro_fcat_270,
Gorilla gorilla ENSGGOG00000028197 ortholog_one2one 2 retrogenes
retro_ggor_2893, retro_ggor_893,
Macaca mulatta ENSMMUG00000002050 ortholog_one2one 2 retrogenes
retro_mmul_2481, retro_mmul_892,
Mustela putorius furo ENSMPUG00000004246 ortholog_one2one 1 retrogene
retro_mputfur_898,
Nomascus leucogenys ENSNLEG00000007337 ortholog_one2one 2 retrogenes
retro_nleu_1096, retro_nleu_946,
Pongo abelii ENSPPYG00000003907 ortholog_one2one 2 retrogenes
retro_pabe_3621, retro_pabe_953,
Pan troglodytes ENSPTRG00000004318 ortholog_one2one 2 retrogenes
retro_ptro_3097, retro_ptro_782,
Rattus norvegicus ENSRNOG00000018032 ortholog_one2one 1 retrogene
retro_rnor_2585,
Sarcophilus harrisii ENSSHAG00000011403 ortholog_one2one 1 retrogene
retro_shar_617,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1148 73.02 81.29
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2. retro_hsap_4661 85.22 100.00
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Download FASTA sequences of all ENSG00000168092 retrocopies