Parental gene: | MSL3, ENSGGOG00000006582 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | X:11639848..11657404(+) |
>ENSGGOG00000006582
ATGAGCGCGAGCGAGGGCATGAAATTTAAATTCCACTCAGGGGAGAAAGTGCTGTGCTTCGAGCCTGACCCCACCAAGGC
GCGAGTGCTGTACGATGCCAAGATTGTTGATGTTATTGTTGGGAAAGACGAAAAAGGCAGAAAGATCCCAGAATATCTGA
TCCATTTTAATGGTTGGAACAGAAGCTGGGATAGATGGGCAGCAGAAGATCATGTGCTTCGTGATACCGATGAAAATCGT
AGATTACAGCGTAAATTGGCAAGAAAAGCTGTAGCTCGCCTGAGGAGCACAGGAAGAAAGAAGAAGCGCTGCAGGTTGCC
TGGTGTGGACTCTGTCTTAAAAGGCCTCCCCACTGAAGAAAAAGATGAAAATGATGAAAACTCATTAAGCAGTTCCTCTG
ACTGTAGTGAAAACAAGGATGAAGAAATAAGTGAAGAAAGTGATATTGAAGAAAAGACTGAAGTGAAAGGAGAACCAGAG
CTTCAAACAAGAAGGGAAATGGAAGAAAGAACAATAACAATAGAAATCCCTGAAGTTCTGAAGAAGCAGCTGGAGGATGA
TTGTTACTACATTAACAGGAGGAAACGGTTAGTGAAACTTCCATGCCAGACCAACATCATAACGATTTTGGAATCCTATG
TGAAGCATTTTGCTATCAGTGCAGCCTTTTCAGCCAATGAGAGGCCTCGTCACCATCACGTTATGCCACATGCCAACATG
AACGTGCATTATATCCCAGCAGAAAAGAATGTTGACCTTTGTAAGGAGATGGTGGATGGATTAAGAATAACCTTTGATTA
CACTCTCCCGTTGGTTTTACTCTATCCATATGAACAAGCTCAGTATAAAAAGGTGACTTCGTCTAAGTTTTTTCTTCCAA
TTAAGGAAAGTGCCACAAGCACTAACAGGAGCCAGGAGGAACTCTCTCCCAGTCCGCCTTTGTTGAATCCATCCACGCCA
CAGTCCACAGAGAGTCAGCCGACCACGGGTGAACCAGCCACCCCCAAAAGGCGCAAAGCTGAGCCAGAAGCATTGCAGTC
TCTGAGGCGGTCCACGCGCCACAGTGCCAACTGTGACAGGCTTTCTGAGAGCAGCGCTTCACCTCAGCCCAAGCGCCGGC
AGCAGGACACATCCGCCAGCATGCCCAAGCTCTTCCTGCACCTGGAAAAGAAAGAGACACCTGTGCATAGCAGATCATCT
TCACCTATTCCTCTGACTCCTAGCAAGGAAGGGAGTGCTGTGTTTGCTGGCTTTGAAGGGAGAAGAACTAATGAAATAAA
CGAGGTCCTCTCCTGGAAGCTTGTGCCTGACAATTACCCCCCAGGTGACCAGCCGCCTCCACCCTCTTACATTTACGGGG
CACAACATTTGCTGCGATTGTTTGTGAAACTTCCAGAAATCCTTGGAAAGATGTCCTTTTCTGAGAAGAATCTGAAGGCT
TTATTGAAGCACTTTGATCTCTTTTTGAGGTTTTTAGCAGAATACCATGATGACTTCTTCCCAGAGTCGGCTTATGTCGC
TGCCTGTGAGGCACATTACAGCACCAAGAACCCCCGGGCAATTTATTAA
ATGAGCGCGAGCGAGGGCATGAAATTTAAATTCCACTCAGGGGAGAAAGTGCTGTGCTTCGAGCCTGACCCCACCAAGGC
GCGAGTGCTGTACGATGCCAAGATTGTTGATGTTATTGTTGGGAAAGACGAAAAAGGCAGAAAGATCCCAGAATATCTGA
TCCATTTTAATGGTTGGAACAGAAGCTGGGATAGATGGGCAGCAGAAGATCATGTGCTTCGTGATACCGATGAAAATCGT
AGATTACAGCGTAAATTGGCAAGAAAAGCTGTAGCTCGCCTGAGGAGCACAGGAAGAAAGAAGAAGCGCTGCAGGTTGCC
TGGTGTGGACTCTGTCTTAAAAGGCCTCCCCACTGAAGAAAAAGATGAAAATGATGAAAACTCATTAAGCAGTTCCTCTG
ACTGTAGTGAAAACAAGGATGAAGAAATAAGTGAAGAAAGTGATATTGAAGAAAAGACTGAAGTGAAAGGAGAACCAGAG
CTTCAAACAAGAAGGGAAATGGAAGAAAGAACAATAACAATAGAAATCCCTGAAGTTCTGAAGAAGCAGCTGGAGGATGA
TTGTTACTACATTAACAGGAGGAAACGGTTAGTGAAACTTCCATGCCAGACCAACATCATAACGATTTTGGAATCCTATG
TGAAGCATTTTGCTATCAGTGCAGCCTTTTCAGCCAATGAGAGGCCTCGTCACCATCACGTTATGCCACATGCCAACATG
AACGTGCATTATATCCCAGCAGAAAAGAATGTTGACCTTTGTAAGGAGATGGTGGATGGATTAAGAATAACCTTTGATTA
CACTCTCCCGTTGGTTTTACTCTATCCATATGAACAAGCTCAGTATAAAAAGGTGACTTCGTCTAAGTTTTTTCTTCCAA
TTAAGGAAAGTGCCACAAGCACTAACAGGAGCCAGGAGGAACTCTCTCCCAGTCCGCCTTTGTTGAATCCATCCACGCCA
CAGTCCACAGAGAGTCAGCCGACCACGGGTGAACCAGCCACCCCCAAAAGGCGCAAAGCTGAGCCAGAAGCATTGCAGTC
TCTGAGGCGGTCCACGCGCCACAGTGCCAACTGTGACAGGCTTTCTGAGAGCAGCGCTTCACCTCAGCCCAAGCGCCGGC
AGCAGGACACATCCGCCAGCATGCCCAAGCTCTTCCTGCACCTGGAAAAGAAAGAGACACCTGTGCATAGCAGATCATCT
TCACCTATTCCTCTGACTCCTAGCAAGGAAGGGAGTGCTGTGTTTGCTGGCTTTGAAGGGAGAAGAACTAATGAAATAAA
CGAGGTCCTCTCCTGGAAGCTTGTGCCTGACAATTACCCCCCAGGTGACCAGCCGCCTCCACCCTCTTACATTTACGGGG
CACAACATTTGCTGCGATTGTTTGTGAAACTTCCAGAAATCCTTGGAAAGATGTCCTTTTCTGAGAAGAATCTGAAGGCT
TTATTGAAGCACTTTGATCTCTTTTTGAGGTTTTTAGCAGAATACCATGATGACTTCTTCCCAGAGTCGGCTTATGTCGC
TGCCTGTGAGGCACATTACAGCACCAAGAACCCCCGGGCAATTTATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 24 .36 RPM |
| SRP007412_cerebellum | 13 .47 RPM |
| SRP007412_heart | 3 .63 RPM |
| SRP007412_kidney | 13 .37 RPM |
| SRP007412_liver | 14 .16 RPM |
| SRP007412_testis | 32 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009278 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000001061 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000004692 | ortholog_one2many | 5 retrogenes | |
| Homo sapiens | ENSG00000005302 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000002689 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000017350 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000020123 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000021662 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000005000 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000008477 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012788 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_1820 | 83.69 | 53.83 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_2749 | 69.96 | 53.07 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000006582 retrocopies