Parental gene: | MSL3, ENSPPYG00000020123 |
| Aliases: | MSL3, MSL3L1 |
| Description: | Male-specific lethal 3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q5R6Y9] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | X:11626862..11644570(+) |
>ENSPPYG00000020123
ATGAGCGCGAGCGAGGGCATGAAATTTAAATTCCACTCAGGGGAGAAAGTGCTGTGCTTCGAGCCTGACCCCACCAAGGC
GCGAGTGCTGTACGATGCCAAGATTGTTGATGTTATTGTTGGGAAAGACGAAAAAGGCAGAAAGATCCCAGAATATCTGA
TCCATTTTAATGGTTGGAACAGAAGCTGGGATAGATGGGCAGCCGAAGATCATGTGCTTCGTGATACCGATGAAAATCGT
AGATTACAGCGTAAATTGGCAAGAAAAGCTGTAGCTCGCCTGAGGAGCACAGGAAGAAAGAAGAAGCGCTGCAGGTTGCC
TGGTGTTGACTCTGTCTTAAAAGGCCTCCCCACTGAAGAAAAAGATGAAAATGATGAAAACTCATTAAGCAGTTCCTCTG
ACTGTAGTGAAAACAAGGATGAAGAAATAAGTGAAGAAAGTGATATTGAAGAAAAGACTGAAGTGAAAGAAGAACCAGAG
CTTCAAACAAGAAGGGAAATGGAAGAAAGAACAATAACTATAGAAATCCCTGAAGTTCTGAAGAAGCAGCTGGAGGATGA
TTGTTACTACATTAACAGGAGGAAACGGTTAGTGAAACTTCCATGCCAGACCAACATCATAACGATTTTGGAATCCTATG
TGAAGCATTTTGCTATCAATGCAGCCTTTTCAGCCAATGAGAGGCCTCGTCACCATCACGTTATGCCACATGCCAACATG
AATGTGCATTATATCCCAGCAGAAAAGAATGTTGACCTTTGTAAGGAGATGGTGGATGGATTAAGAATAACCTTTGATTA
CACTCTCCCGTTGGTTTTACTCTATCCGTATGAACAAGCTCAGTATAAAAAGGTGACTTCGTCTAAGTTTTTTCTTCCAA
TTAAGGAAAGTGCCACAAGCACTAACAGGAGCCAGGAGGAACTCTCTCCCAGCCCGCCTTTGTTGAATCCATCCACGCCA
CAGTCCACAGAGAGTCAGCCGACCACCGGTGAACCAGCCACCCCCAAAAGGCGCAAAGCTGAGCCAGAAGCATTGCAGTC
GCTGAGGCGGTCCACGCGCCACAGTGCCAACTGTGACAGGCTTTCTGAGAGCAGCGCTTCACCTCAGCCCAAGCGCCGGC
AGCAGGACACGTCCGGCAGCATGCCCAAGCTCTTCCTGCACCTGGAAAAGAAGACACCTGTGCATAGCAGATCATCTTCA
CCTATTCCTCTGACTCCTAGCAAGGAAGGGAGTGCTGTGTTTGCTGGCTTTGAAGGGAGAAGAACTAATGAAATAAACGA
GGTCCTCTCCTGGAAGCTTGTGCCTGACAATTACCCGCCAGGTGACCAGCCGCCTCCACCCTCTTACATTTACGGGGCAC
AACATTTGCTGCGATTGTTTGTGAAACTTCCAGAAATCCTTGGTAAGATGTCCTTTTCTGAGAAGAATCTGAAGGCTTTA
TTGAAGCACTTTGATCTCTTTTTGAGGTTTTTAGCAGAATACCATGATGACTTCTTCCCAGAGTCGGCTTACGTCGCTGC
CTGTGAGGCACATTACAGCACCAAGAACCCCCGGGCAATTTATTAA
ATGAGCGCGAGCGAGGGCATGAAATTTAAATTCCACTCAGGGGAGAAAGTGCTGTGCTTCGAGCCTGACCCCACCAAGGC
GCGAGTGCTGTACGATGCCAAGATTGTTGATGTTATTGTTGGGAAAGACGAAAAAGGCAGAAAGATCCCAGAATATCTGA
TCCATTTTAATGGTTGGAACAGAAGCTGGGATAGATGGGCAGCCGAAGATCATGTGCTTCGTGATACCGATGAAAATCGT
AGATTACAGCGTAAATTGGCAAGAAAAGCTGTAGCTCGCCTGAGGAGCACAGGAAGAAAGAAGAAGCGCTGCAGGTTGCC
TGGTGTTGACTCTGTCTTAAAAGGCCTCCCCACTGAAGAAAAAGATGAAAATGATGAAAACTCATTAAGCAGTTCCTCTG
ACTGTAGTGAAAACAAGGATGAAGAAATAAGTGAAGAAAGTGATATTGAAGAAAAGACTGAAGTGAAAGAAGAACCAGAG
CTTCAAACAAGAAGGGAAATGGAAGAAAGAACAATAACTATAGAAATCCCTGAAGTTCTGAAGAAGCAGCTGGAGGATGA
TTGTTACTACATTAACAGGAGGAAACGGTTAGTGAAACTTCCATGCCAGACCAACATCATAACGATTTTGGAATCCTATG
TGAAGCATTTTGCTATCAATGCAGCCTTTTCAGCCAATGAGAGGCCTCGTCACCATCACGTTATGCCACATGCCAACATG
AATGTGCATTATATCCCAGCAGAAAAGAATGTTGACCTTTGTAAGGAGATGGTGGATGGATTAAGAATAACCTTTGATTA
CACTCTCCCGTTGGTTTTACTCTATCCGTATGAACAAGCTCAGTATAAAAAGGTGACTTCGTCTAAGTTTTTTCTTCCAA
TTAAGGAAAGTGCCACAAGCACTAACAGGAGCCAGGAGGAACTCTCTCCCAGCCCGCCTTTGTTGAATCCATCCACGCCA
CAGTCCACAGAGAGTCAGCCGACCACCGGTGAACCAGCCACCCCCAAAAGGCGCAAAGCTGAGCCAGAAGCATTGCAGTC
GCTGAGGCGGTCCACGCGCCACAGTGCCAACTGTGACAGGCTTTCTGAGAGCAGCGCTTCACCTCAGCCCAAGCGCCGGC
AGCAGGACACGTCCGGCAGCATGCCCAAGCTCTTCCTGCACCTGGAAAAGAAGACACCTGTGCATAGCAGATCATCTTCA
CCTATTCCTCTGACTCCTAGCAAGGAAGGGAGTGCTGTGTTTGCTGGCTTTGAAGGGAGAAGAACTAATGAAATAAACGA
GGTCCTCTCCTGGAAGCTTGTGCCTGACAATTACCCGCCAGGTGACCAGCCGCCTCCACCCTCTTACATTTACGGGGCAC
AACATTTGCTGCGATTGTTTGTGAAACTTCCAGAAATCCTTGGTAAGATGTCCTTTTCTGAGAAGAATCTGAAGGCTTTA
TTGAAGCACTTTGATCTCTTTTTGAGGTTTTTAGCAGAATACCATGATGACTTCTTCCCAGAGTCGGCTTACGTCGCTGC
CTGTGAGGCACATTACAGCACCAAGAACCCCCGGGCAATTTATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 29 .86 RPM |
| SRP007412_cerebellum | 14 .96 RPM |
| SRP007412_heart | 5 .36 RPM |
| SRP007412_kidney | 10 .24 RPM |
| SRP007412_liver | 8 .17 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009278 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000001061 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000004692 | ortholog_one2many | 5 retrogenes | |
| Homo sapiens | ENSG00000005302 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006582 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000002689 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000017350 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000021662 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000005000 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000008477 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012788 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2166 | 86.26 | 84.64 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3353 | 67.89 | 72.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000020123 retrocopies