Parental gene: | MSL3, ENSTSYG00000012788 |
| Aliases: | None |
| Description: | male-specific lethal 3 homolog (Drosophila) [Source:HGNC Symbol;Acc:7370] |
| Organism: | Tarsier (Tarsius syrichta) |
| Coordinates: | GeneScaffold_47:12965..28122(+) |
>ENSTSYG00000012788
ATTGTCGATGTTATTGTTGGGAAAGACGAAAAAGGCAGAAAGATCCCAGAATATCTGATCCATTTTAATGGTTGGAACAG
AAGCTGGGATAGATGGGCAGCCGAAGATCATGTACTTCGTGATACTGATGAAAATCGTAGATTACAGCGTAAATTGGCAA
GAAAAGCTGTAGCTCGCCTGAGAAGCACAGGAAGGAAAAAGAAACGCTGCAGATTGCCTGGTGTCGACTCTGTCTTAAAA
AGCCTCCCCATTGACGAAAAAGATGAAAATGATGAAAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGAAGAACCGGAGCTGCAAACAAAAAGGGAAATGG
AAGAAAGAACAATAACTATAGAAATCCCTGAAGTTCTAAAGAAGCAGCTTGAGGATGATTGTTACTATATTAACCGGAGG
AAACGGTTAGTGAAACTTCCATGCCAGACCAATATCATAACAATTTTGGAGTCCTATGTGAAGCATTTTGCTATCAATGC
AGCCTTTTCAGCCAATGAGAGGCCTCGTCACCATCACGCTATGGCACATGCCAACATGAATGTGCATTATATACCAGCAG
AAAAGAATGTTGACCTTTGTAAGGAGATGGTGGATGGATTAAGAATAACTTTTGATTATACCCTCCCGTTGGTTTTACTC
TATCCATATGAACAAACTCAGTATAAGAAGGTGACTTCGTCTAAGTTTTTTCTTCCAATTAAGGAAAGTGCCACAAACAC
CAGTAGGAGCCNNNNNNNNNNNNNNNNNAATTCGCCTTTGTTGAATCCATCTACGCCGCAGTCCACAGAGAGTCAACCAG
CCTCAGGTGAGCCGGCCACCCCCAAGAGGCGCAAAGCTGAGCCGGAAGCATTGCAGTCTCTGAGGCGGTCCACGCGCCAC
ACCACCAACTGTGACAGGCTGTCTGAAAGCAGTGCCTCACCTCAGCCCAAGCGCCGGCAGCAGGACACGTCTGCCAGCAT
GCCCAAACTGTTCCTGCACCTGGAAAAGAAGACACCTGTGCACAGCAGATCATCTTCACCTATTCCCCTGACTCCTAGCA
AAGAAGGGAGTGCAGTGTTTGCTGGTTTTGAAGGGAGAAGAACTAATGAGATTAACGAGGTCCTCTCCTGGAAGCTGGTG
CCTGACAATTACCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
GAAACTTCCAGAAATCCTTGGAAAGATGTCTTTTTCTGACAAGAATCTGAAGGCTTTACTGAAGCACTTTGATCTCTTTC
TGAGGTTTTTAGCAGAATACCATGATGACTTCTTCCCAGAGTCTGCTTATGTTGCTGCCTGTGAGGCACATTACAGCACC
AAGAACCCCCGGGCAATCTACTAA
ATTGTCGATGTTATTGTTGGGAAAGACGAAAAAGGCAGAAAGATCCCAGAATATCTGATCCATTTTAATGGTTGGAACAG
AAGCTGGGATAGATGGGCAGCCGAAGATCATGTACTTCGTGATACTGATGAAAATCGTAGATTACAGCGTAAATTGGCAA
GAAAAGCTGTAGCTCGCCTGAGAAGCACAGGAAGGAAAAAGAAACGCTGCAGATTGCCTGGTGTCGACTCTGTCTTAAAA
AGCCTCCCCATTGACGAAAAAGATGAAAATGATGAAAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGAAGAACCGGAGCTGCAAACAAAAAGGGAAATGG
AAGAAAGAACAATAACTATAGAAATCCCTGAAGTTCTAAAGAAGCAGCTTGAGGATGATTGTTACTATATTAACCGGAGG
AAACGGTTAGTGAAACTTCCATGCCAGACCAATATCATAACAATTTTGGAGTCCTATGTGAAGCATTTTGCTATCAATGC
AGCCTTTTCAGCCAATGAGAGGCCTCGTCACCATCACGCTATGGCACATGCCAACATGAATGTGCATTATATACCAGCAG
AAAAGAATGTTGACCTTTGTAAGGAGATGGTGGATGGATTAAGAATAACTTTTGATTATACCCTCCCGTTGGTTTTACTC
TATCCATATGAACAAACTCAGTATAAGAAGGTGACTTCGTCTAAGTTTTTTCTTCCAATTAAGGAAAGTGCCACAAACAC
CAGTAGGAGCCNNNNNNNNNNNNNNNNNAATTCGCCTTTGTTGAATCCATCTACGCCGCAGTCCACAGAGAGTCAACCAG
CCTCAGGTGAGCCGGCCACCCCCAAGAGGCGCAAAGCTGAGCCGGAAGCATTGCAGTCTCTGAGGCGGTCCACGCGCCAC
ACCACCAACTGTGACAGGCTGTCTGAAAGCAGTGCCTCACCTCAGCCCAAGCGCCGGCAGCAGGACACGTCTGCCAGCAT
GCCCAAACTGTTCCTGCACCTGGAAAAGAAGACACCTGTGCACAGCAGATCATCTTCACCTATTCCCCTGACTCCTAGCA
AAGAAGGGAGTGCAGTGTTTGCTGGTTTTGAAGGGAGAAGAACTAATGAGATTAACGAGGTCCTCTCCTGGAAGCTGGTG
CCTGACAATTACCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
GAAACTTCCAGAAATCCTTGGAAAGATGTCTTTTTCTGACAAGAATCTGAAGGCTTTACTGAAGCACTTTGATCTCTTTC
TGAGGTTTTTAGCAGAATACCATGATGACTTCTTCCCAGAGTCTGCTTATGTTGCTGCCTGTGAGGCACATTACAGCACC
AAGAACCCCCGGGCAATCTACTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009278 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000001061 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000004692 | ortholog_one2many | 5 retrogenes | |
| Homo sapiens | ENSG00000005302 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006582 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000002689 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000017350 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000020123 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000021662 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000005000 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000008477 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tsyr_948 | 66.20 | 58.11 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tsyr_1079 | 66.67 | 58.11 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tsyr_1649 | 54.77 | 57.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tsyr_1706 | 66.32 | 58.11 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTSYG00000012788 retrocopies