Parental gene:

MSL3, ENSMMUG00000002689

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:X:9442233..9457539(+)


>ENSMMUG00000002689
CAGATTGTTGATGTTATTGTTGGGAAAGACGAAAAAGGCAGAAAGATCCCAGAATATCTGATCCATTTTAATGGTTGGAA
CAGAAGAACTTTGTTTCATTTCCTGTTTTTACTTTGTAACACTGCAAACTTCTTTACATTACAGCGTAAATTGGCAAGAA
AAGCTGTAGCTCGCCTGAGGAGCACAGGAAGAAAGAAGAAGCGCTGCAGGTTGCCTGGTGTTGACTCTGTCTTAAAAGGC
CTCCCCACTGAAGAAAAAGATGAAAATGATGAAAACTCATTAAGCAGTTCCTCTGACTGTAGTGAAGACAAGGATGAAGA
AATAAGTGAAGAAAGTGATATTGAAGAAAAGACTGAGGTGAAAGAAGAACCAGAGCTTCAAACAAAAAGGGAAATGGAAG
AAAGAACAATAACCATAGAAATCCCTGAAGTTCTGAAGAAGCAGCTGGAGGATGATTGTTACTACATTAACAGGAGGAAA
CGGTTAGTGAAACTTCCATGCCAGACCAACATCATAACGATTTTGGAATCCTATGTGAAGCATTTTGCTATCAATGCAGC
CTTTTCAGCCAATGAGAGACCTCGTCACCATCACGTTATGCCACATGCCAACATGAACGTGCATTATATCCCAGCAGAAA
AGAATGTTGACCTTTGTAAGGAGATGGTGGATGGATTAAGAATAACCTTTGATTACACTCTCCCGTTGGTTTTACTCTAT
CCATATGAGCAAGCTCAGTATAAAAAGGTGACTTCGTCTAAGTTTTTTCTTCCCATTAAGGAAAGTGCCACAAGCACTAA
CAGGAGCCAGGAGGAACTCTCTCCCAGCCCGCCTTTGTTGAATCCATCCACGCCACAGTCCACAGAGAGTCAGCCGACCA
CTGGTGAACCAGCCACCCCTAAAAGGCGCAAAGCTGAGCCAGAAGCATTGCAGTCTCTGAGGCGGTCCACGCGCCACAGT
GCCAACAGTGACAGGCTTTCCGAGAGCAGCGCTTCACCTCAGCCCAAGCGCCGGCAGCAGGACACGTCCGCCAGCATGCC
CAAGCTCTTCCTGCACCTGGAAAAGAAAACACCTGTGCATAGCAGATCATCTTCACCTATTCCTCTGACTCCTAGCAAGG
AAGGGAGTGCTGTGTTTGCTGGCTTTGAAGGGAGAAGAACTAATGAAATAAATGAGGTCCTTTCCTGGAAACTTGTGCCT
GACAATTACCCGCCAGGTGACCAGCCGCCTCCACCCTCTTACATTTATGGGGCACAACATTTGTTGCGATTGTTTGTGAA
ACTTCCGGAAATCCTTGGAAAGATGTCCTTTTCTGAGAAGAATCTGAAGGCTTTATTGAAGCACTTTGATCTCTTTTTGA
GGTTTTTAGCAGAATACCATGATGACTTCTTCCCAGAGTCGGCTTACGTCGCTGCCTGTGAGGCACATTACAGCACCAAG
AACCCCCGGGCAATTTATTAA

Library Parental gene expression (RPM)
SRP007412_brain 25 .21 RPM
SRP007412_brain_prefrontal_cortex 21 .10 RPM
SRP007412_cerebellum 18 .27 RPM
SRP007412_heart 6 .65 RPM
SRP007412_kidney 11 .62 RPM
SRP007412_liver 4 .75 RPM
SRP007412_testis 17 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009278 ortholog_one2one 1 retrogene
retro_btau_883,
Callithrix jacchus ENSCJAG00000001061 ortholog_one2one 1 retrogene
retro_cjac_1490,
Cavia porcellus ENSCPOG00000004692 ortholog_one2many 5 retrogenes
retro_cpor_1423, retro_cpor_1424, retro_cpor_1425, retro_cpor_1426, retro_cpor_95,
Homo sapiens ENSG00000005302 ortholog_one2one 2 retrogenes
retro_hsap_2401, retro_hsap_4097,
Gorilla gorilla ENSGGOG00000006582 ortholog_one2one 2 retrogenes
retro_ggor_1820, retro_ggor_2749,
Monodelphis domestica ENSMODG00000017350 ortholog_one2one 1 retrogene
retro_mdom_1422,
Pongo abelii ENSPPYG00000020123 ortholog_one2one 2 retrogenes
retro_pabe_2166, retro_pabe_3353,
Pan troglodytes ENSPTRG00000021662 ortholog_one2one 2 retrogenes
retro_ptro_1751, retro_ptro_2778,
Pteropus vampyrus ENSPVAG00000005000 ortholog_one2one 1 retrogene
retro_pvam_203,
Sorex araneus ENSSARG00000008477 ortholog_one2one 1 retrogene
retro_sara_139,
Tarsius syrichta ENSTSYG00000012788 ortholog_one2one 4 retrogenes
retro_tsyr_1079, retro_tsyr_1649, retro_tsyr_1706, retro_tsyr_948,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_972 85.75 84.16
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2. retro_mmul_2362 71.60 51.85
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Download FASTA sequences of all ENSMMUG00000002689 retrocopies