Parental gene: | MMU.2373, ENSMMUG00000011125 |
| Aliases: | None |
| Description: | 26S proteasome non-ATPase regulatory subunit 7 [Source:RefSeq peptide;Acc:NP_001244743] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 20:68350531..68358947(-) |
>ENSMMUG00000011125
ATGCCGGAGCTGGCGGTGCAGAAGGTGGTGGTCCACCCCCTGGTGTTGCTCAGTGTGGTGGATCATTTCAACCGAATCGG
CAAGGTTGGAAATCAGAAGCGCGTTGTTGGTGTGCTTTTGGGCTCATGGCAAAAGAAAGTACTTGATGTATCGAACAGTT
TTGCAGTTCCTTTTGACGAAGATGACAAAGACGATTCTGTGTGGTTTTTAGACCATGATTATTTGGAAAACATGTATGGA
ATGTTTAAGAAAGTCAATGCCAGAGAAAGAATAGTTGGCTGGTACCACACAGGCCCTAAACTACACAAGAATGACATTGC
CATCAACGAACTCATGAAAAGATACTGTCCTAATTCCGTATTGGTCATCATTGATGTGAAGCCGAAGGACCTAGGGCTGC
CCACAGAAGCGTACATTTCAGTGGAAGAAGTCCATGATGATGGAACCCCAACCTCAAAAACATTTGAACACGTGACCAGT
GAAATTGGAGCAGAGGAAGCTGAGGAAGTTGGAGTTGAACACCTGTTACGAGACATCAAAGACACGACGGTGGGCACTCT
GTCCCAGCGGATCACAAACCAGGTCCATGGTTTGAAGGGACTGAACTCCAAGCTTCTGGATATCAGGAGCTACCTGGAAA
AAGTCGCCACAGGCAAGCTGCCTATCAACCACCAGATCATCTACCAGCTGCAGGACGTCTTCAACCTGCTGCCAGACGTC
AGCCTGCAGGAGTTTGTCAAGGCCTTTTACCTGAAGACCAACGACCAGATGGTGGTAGTGTACTTGGCCTCGCTGATCCG
TTCCGTGGTCGCCCTGCACAACCTCATCAACAACAAGATTGCCAACCGCGATGCAGAGAAGAAAGAAGGGCAGGAGAAAG
AAGACAGCAAAAAGGATAGGAAAGAGGACAAGGAGAAAGATAAGGAAAAGAGTGATGTAAAGAAAGAGGAGAAAAAGGAG
AAAAAGTAA
ATGCCGGAGCTGGCGGTGCAGAAGGTGGTGGTCCACCCCCTGGTGTTGCTCAGTGTGGTGGATCATTTCAACCGAATCGG
CAAGGTTGGAAATCAGAAGCGCGTTGTTGGTGTGCTTTTGGGCTCATGGCAAAAGAAAGTACTTGATGTATCGAACAGTT
TTGCAGTTCCTTTTGACGAAGATGACAAAGACGATTCTGTGTGGTTTTTAGACCATGATTATTTGGAAAACATGTATGGA
ATGTTTAAGAAAGTCAATGCCAGAGAAAGAATAGTTGGCTGGTACCACACAGGCCCTAAACTACACAAGAATGACATTGC
CATCAACGAACTCATGAAAAGATACTGTCCTAATTCCGTATTGGTCATCATTGATGTGAAGCCGAAGGACCTAGGGCTGC
CCACAGAAGCGTACATTTCAGTGGAAGAAGTCCATGATGATGGAACCCCAACCTCAAAAACATTTGAACACGTGACCAGT
GAAATTGGAGCAGAGGAAGCTGAGGAAGTTGGAGTTGAACACCTGTTACGAGACATCAAAGACACGACGGTGGGCACTCT
GTCCCAGCGGATCACAAACCAGGTCCATGGTTTGAAGGGACTGAACTCCAAGCTTCTGGATATCAGGAGCTACCTGGAAA
AAGTCGCCACAGGCAAGCTGCCTATCAACCACCAGATCATCTACCAGCTGCAGGACGTCTTCAACCTGCTGCCAGACGTC
AGCCTGCAGGAGTTTGTCAAGGCCTTTTACCTGAAGACCAACGACCAGATGGTGGTAGTGTACTTGGCCTCGCTGATCCG
TTCCGTGGTCGCCCTGCACAACCTCATCAACAACAAGATTGCCAACCGCGATGCAGAGAAGAAAGAAGGGCAGGAGAAAG
AAGACAGCAAAAAGGATAGGAAAGAGGACAAGGAGAAAGATAAGGAAAAGAGTGATGTAAAGAAAGAGGAGAAAAAGGAG
AAAAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 40 .62 RPM |
| SRP007412_brain | 37 .42 RPM |
| SRP007412_cerebellum | 31 .00 RPM |
| SRP007412_heart | 26 .68 RPM |
| SRP007412_kidney | 28 .87 RPM |
| SRP007412_liver | 26 .56 RPM |
| SRP007412_testis | 46 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015129 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000103035 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000009774 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000005416 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000013440 | within_species_paralog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000015010 | within_species_paralog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005608 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014868 | possible_ortholog | 1 retrogene | |
| Procavia capensis | ENSPCAG00000014356 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025918 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008343 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000016950 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_372 | 74.78 | 70.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_417 | 75.93 | 66.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_566 | 74.21 | 67.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_1242 | 85.52 | 88.82 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000011125 retrocopies