Parental gene:

MMU.11028, ENSMMUG00000013514

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:11:124669355..124687836(+)


>ENSMMUG00000013514
GAGAATGTGTTTACCGGGCAGTCAAAGATCTATTCCTACATGAGCCCGAACAAATGCTCTGGAATGCGTTTCCCCCTTCA
GGAAGAGAACTCAGTTACACATCACGAAGTCAAATGCCAGGGGAAACCATTAGCTGGAATCTACAGGAAACGAGAAGAGA
AAAGAAATGCTGGGAATGCAGTACGGAGCGCCATGAAGTCCGAGGAACAGAAGATCAAAGACGCCAGGAGAGGTCCCCTG
GCACCTTTTCCAAACCAAAAATCTGAAGCAGCAGAACCTCCAAAAACTCCACCCTCATCTTGTGATTCCACCAATGCAGC
CATCACCAAGCAAGCCCTGAAAAAGCCCATCAAGGGCAAACAGGCCCCCCGAAAAAAAGCTCAAGGAAAAACGCAACAGA
ACCGCAAACTTACGGATTTCTACCCTGTCCGAAGGAGCTCCAGGAAGAGCAAAGCCGAGCTGCAGTCTGAAGAAAGGAAA
AGAATAGATGAATTGATTGAGAGTGGGAAGGAAGAAGGGATGAAGATTGACCTCATCGATGGCAAAGGCAGGGGTGTGAT
TGCCACCAAGCAGTTCTCCCGAGGTGACTTTGTGGTGGAATACCACGGGGACCTCATCGAGATCACCGATGCCAAGAAAC
GGGAGGCTCTGTACGCACAGGACCCTTCCACGGGCTGTTACATGTACTATTTTCAGTATCTGAGCAAAACCTATTGCGTG
GATGCAACTAGAGAGACAAATCGCCTAGGAAGACTGATCAATCATAGCAAATGTGGGAACTGCCAAACCAAACTGCACGA
CATTGACGGCGTACCTCACCTCATCCTCATCGCCTCCCGAGACATTGCGGCTGGGGAGGAGCTCCTGTATGACTATGGGG
ACCGCAGCAAGGCTTCCATTGAAGCTCACCCGTGGCTGAAGCATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 14 .68 RPM
SRP007412_brain 14 .34 RPM
SRP007412_cerebellum 14 .08 RPM
SRP007412_heart 11 .48 RPM
SRP007412_kidney 9 .15 RPM
SRP007412_liver 3 .80 RPM
SRP007412_testis 6 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000183955 ortholog_one2one 2 retrogenes
retro_hsap_2294, retro_hsap_4320,
Mus musculus ENSMUSG00000049327 ortholog_one2one 2 retrogenes
retro_mmus_1459, retro_mmus_3478,
Otolemur garnettii ENSOGAG00000031093 ortholog_one2one 1 retrogene
retro_ogar_1217,
Pongo abelii ENSPPYG00000005085 ortholog_one2one 2 retrogenes
retro_pabe_1347, retro_pabe_1381,
Pan troglodytes ENSPTRG00000005598 ortholog_one2one 1 retrogene
retro_ptro_1622,
Rattus norvegicus ENSRNOG00000001062 ortholog_one2many 4 retrogenes
retro_rnor_1551, retro_rnor_2837, retro_rnor_38, retro_rnor_679,
Sarcophilus harrisii ENSSHAG00000015376 ortholog_one2many 2 retrogenes
retro_shar_110, retro_shar_115,
Tursiops truncatus ENSTTRG00000015884 ortholog_one2one 1 retrogene
retro_ttru_1301,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1579 70.13 100.00
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Download FASTA sequences of all ENSMMUG00000013514 retrocopies