Parental gene: | SETD8, ENSPPYG00000005085 |
| Aliases: | None |
| Description: | SET domain containing (lysine methyltransferase) 8 [Source:HGNC Symbol;Acc:29489] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 12:125756115..125784258(+) |
>ENSPPYG00000005085
ATGGCTAGAGAGAACGTATTTACCGGGCAGTCAAAGATCTATTCCTACATGAGCCCGAACAAATGCTCTGGAATGCGTTT
CCCCCTTCAGGAAGAGAACTCAGTTGCACATCACGAAGTCAAATGCCAGGGGAAACCATTAGCCGGAATCTACAGGAAAC
GAGAAGAGAAAAGAAATGCTGGGAACGCAGTACGGAGTGCCATGAAGTCCGAGGAACAGAAGATCAAAGACGCCAGGAGA
GGTCCCCTGGCACCTTTTCCAAACCAAAAATCTGAAGCAGCAGAACCTCCAAAAACTCCACCCTCATCTTGTGATTCCAC
CAATGCAGCCATCGCCAAGCAAGCCCTGAAAAAGCCCATCAAGGGCAAACAGGCCCCCCGAAAAAAAGCTCAAGGAAAAA
CGCAACAGAATCGCAAACTTACGGATTTCTACCCTGTCCGAAGGAGCTCCAGGAAGAGCAAAGCCGAGTTGCAGTCTGAA
GAAAGGAAAAGAATAGATGAATTGATTGAAAGTGGGAAGGAAGAAGGAATGAAGATTGACCTCATCGATGGCAAAGGCAG
GGGTGTGATTGCCACCAAGCAGTTCTCCCGGGGTGACTTTGTGGTGGAATACCACGGGGACCTCATCGAGATCACCGACG
CCAAGAAACGGGAGGCTCTGTACGCACAGGACCCTTCCACGGGCTGCTACATGTACTATTTTCAGTATCTGAGCAAAACC
TACTGCGTGGATGCAACTAGAGAGACAAATCGCCTGGGAAGACTGATCAATCACAGCAAATGTGGGAACTGCCAAACCAA
ACTGCACGACATCGACGGCGTACCTCACCTCATCCTCATTGCCTCCCGAGACATCGCGGCTGGGGAGGAGCTCCTGTATG
ACTATGGGGACCGCAGCAAGGCTTCCATTGAAGCCCACCCGTGGCTGAAGCATTAA
ATGGCTAGAGAGAACGTATTTACCGGGCAGTCAAAGATCTATTCCTACATGAGCCCGAACAAATGCTCTGGAATGCGTTT
CCCCCTTCAGGAAGAGAACTCAGTTGCACATCACGAAGTCAAATGCCAGGGGAAACCATTAGCCGGAATCTACAGGAAAC
GAGAAGAGAAAAGAAATGCTGGGAACGCAGTACGGAGTGCCATGAAGTCCGAGGAACAGAAGATCAAAGACGCCAGGAGA
GGTCCCCTGGCACCTTTTCCAAACCAAAAATCTGAAGCAGCAGAACCTCCAAAAACTCCACCCTCATCTTGTGATTCCAC
CAATGCAGCCATCGCCAAGCAAGCCCTGAAAAAGCCCATCAAGGGCAAACAGGCCCCCCGAAAAAAAGCTCAAGGAAAAA
CGCAACAGAATCGCAAACTTACGGATTTCTACCCTGTCCGAAGGAGCTCCAGGAAGAGCAAAGCCGAGTTGCAGTCTGAA
GAAAGGAAAAGAATAGATGAATTGATTGAAAGTGGGAAGGAAGAAGGAATGAAGATTGACCTCATCGATGGCAAAGGCAG
GGGTGTGATTGCCACCAAGCAGTTCTCCCGGGGTGACTTTGTGGTGGAATACCACGGGGACCTCATCGAGATCACCGACG
CCAAGAAACGGGAGGCTCTGTACGCACAGGACCCTTCCACGGGCTGCTACATGTACTATTTTCAGTATCTGAGCAAAACC
TACTGCGTGGATGCAACTAGAGAGACAAATCGCCTGGGAAGACTGATCAATCACAGCAAATGTGGGAACTGCCAAACCAA
ACTGCACGACATCGACGGCGTACCTCACCTCATCCTCATTGCCTCCCGAGACATCGCGGCTGGGGAGGAGCTCCTGTATG
ACTATGGGGACCGCAGCAAGGCTTCCATTGAAGCCCACCCGTGGCTGAAGCATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 22 .50 RPM |
| SRP007412_cerebellum | 34 .66 RPM |
| SRP007412_heart | 14 .06 RPM |
| SRP007412_kidney | 35 .30 RPM |
| SRP007412_liver | 14 .96 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000183955 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000013514 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000049327 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000031093 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000005598 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000001062 | ortholog_one2many | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000015376 | ortholog_one2many | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000015884 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1347 | 72.28 | 63.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1381 | 72.10 | 99.04 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000005085 retrocopies