Parental gene:

SETD8, ENSPTRG00000005598

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:124229630..124255892(+)


>ENSPTRG00000005598
ATGGCTAGAGGCAGGAAGATGTCCAAGCCCCGCGCGGTGGAGGCGGCGGCGGCGGCGGCGGCGGTGGCAGCGACGGCCCC
GGGCCCGGAGATGGTGGAGCGGAGGGGCCCGGGGAGGCCCCGCACCGACGGGGAAAACGTATTTACCGGGCAGTCAAAGA
TCTATTCCTACATGAGCCCGAACAAATGCTCTGGAATGCGTTTCCCCCTTCAGGAAGAGAACTCAGTTACACATCACGAA
GTCAAATGCCAGGGGAAACCATTAGCCGGAATCTACAGGAAACGAGAAGAGAAAAGAAATGCTGGGAACGCAGTACGGAG
CGCCATGAAGTCCGAGGAACAGAAGATCAAAGACGCCAGGAGAGGTCCCCTGGTACCTTTTCCAAACCAAAAATCTGAAG
CAGCAGAACCTCCAAAAACTCCACCCTCATCTTGTGATTCCACCAATGCAGCCATTGCCAAGCAAGCCCTGAAAAAGCCC
ATCAAGGGCAAACAGGCCCCTCGAAAAAAAGCTCAAGGAAAAACGCAACAGAATCGCAAACTTACGGATTTCTACCCTGT
CCGAAGGAGCTCCAGGAAGAGCAAAGCCGAGCTGCAGTCTGAAGAAAGGAAAAGAATAGATGAATTGATTGAAAGTGGGA
AGGAAGAAGGAATGAAGATTGACCTCATCGATGGCAAAGGCAGGGGTGTGATTGCCACCAAGCAGTTCTCCCGGGGTGAC
TTTGTGGTGGAATACCACGGGGACCTCATCGAGATCACCGACGCCAAGAAACGGGAGGCTCTGTACGCACAGGACCCTTC
CACAGGCTGCTACATGTACTATTTTCAGTATCTGAGCAAAACCTACTGCGTGGATGCAACTAGAGAGACAAATCGCCTAG
GAAGACTGATCAATCACAGCAAATGTGGGAACTGCCAAACCAAACTGCACGACATCGACGGCGTACCTCACCTCATCCTC
ATCGCCTCCCGCGACATCGCGGCTGGGGAGGAGCTCCTGTATGACTATGGGGACCGCAGCAAGGCTTCCATTGAAGCTCA
CCCGTGGCTGAAGCATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 26 .44 RPM
SRP007412_cerebellum 19 .68 RPM
SRP007412_heart 20 .31 RPM
SRP007412_kidney 20 .63 RPM
SRP007412_liver 19 .90 RPM
SRP007412_testis 7 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000183955 ortholog_one2one 2 retrogenes
retro_hsap_2294, retro_hsap_4320,
Macaca mulatta ENSMMUG00000013514 ortholog_one2one 1 retrogene
retro_mmul_1579,
Mus musculus ENSMUSG00000049327 ortholog_one2one 2 retrogenes
retro_mmus_1459, retro_mmus_3478,
Otolemur garnettii ENSOGAG00000031093 ortholog_one2one 1 retrogene
retro_ogar_1217,
Pongo abelii ENSPPYG00000005085 ortholog_one2one 2 retrogenes
retro_pabe_1347, retro_pabe_1381,
Rattus norvegicus ENSRNOG00000001062 ortholog_one2many 4 retrogenes
retro_rnor_1551, retro_rnor_2837, retro_rnor_38, retro_rnor_679,
Sarcophilus harrisii ENSSHAG00000015376 ortholog_one2many 2 retrogenes
retro_shar_110, retro_shar_115,
Tursiops truncatus ENSTTRG00000015884 ortholog_one2one 1 retrogene
retro_ttru_1301,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1622 92.50 56.53
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Download FASTA sequences of all ENSPTRG00000005598 retrocopies