Parental gene: | Setd8, ENSMUSG00000049327 |
| Aliases: | Setd8, 2410195B05Rik, AA617402, AW536475, PR-SET7 |
| Description: | SET domain containing (lysine methyltransferase) 8 [Source:MGI Symbol;Acc:MGI:1915206] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 5:124439929..124462308(+) |
>ENSMUSG00000049327
ATGGCTAGAGGCAGGAAGATGTGCAAGCCCCGCGCGGTGGAGGCGGCGGCGGCGGCGGTGGCGGCGACGGCCCCGGGCCC
GGAGATGGTGGAGCAGAGGGGCCCGGGGAGGCCCCGCAGCGACGGGGAGAACGTGTTTGCTGGGCAGTCAAAGATCTATG
CCTACATGAGTCCGAACAAGTGCTCTGCAATGCGCTCTCCACTTCAGGAAGAGAACTCGGTTGCCCATCATGAGGTCAAA
TGCCCGGGGAAACCATTAGCTGGAATCTACAGGAAGCGAGAAGAGAAAAGGAACACCGGGAACGTTATACGAAGCGCTGT
GAAGTCAGATGAACAGAAGAGCAAAGACACCAGGAGAGGTCCCCTGGCGCCTTTTCCAAACCAAAAATCCGAAGCAGCAG
AACCTCCAAAAACTCCACCCCCATCATGTGATTCTACCAATGTAGCAGTCGCTAAGCAAGCCCTGAAAAAGTCCCTCAAG
GGCAAACAGGCCCCTCGGAAAAAGTCTCAAGGGAAAACCCAGCAGAATAGAAAACTCACAGATTTCTACCCTGTGCGGAG
GAGTTCCCGGAAGAGCAAAGCTGAGCTGCAGTCTGAAGAAAGGAAGAAAATAGATGAGCTGATTGAGAGCGGGAAGGAAG
AAGGCATGAAGATTGATCTAATTGATGGCAAAGGCAGGGGTGTGATCGCTACCAAGCAGTTCTCCAGGGGAGACTTTGTG
GTAGAATACCATGGGGACCTCATTGAAATCACTGATGCCAAGAAGCGGGAGGCTCTGTACGCACAGGACCCCTCCACTGG
CTGCTACATGTACTATTTTCAGTATCTGAGCAAAACCTACTGCGTGGATGCCACTCAAGAAACGAACCGCCTAGGGAGAC
TCATCAATCACAGTAAGTGTGGGAACTGCCAGACCAAACTGCACGACATCGACGGCGTGCCTCACCTCATCCTCATCGCC
TCCCGAGACATCGCAGCTGGGGAGGAGCTCCTGTACGACTATGGGGACCGAAGCAAGGCCTCCATCGAAGCCTACCCCTG
GCTGAAGCACTAA
ATGGCTAGAGGCAGGAAGATGTGCAAGCCCCGCGCGGTGGAGGCGGCGGCGGCGGCGGTGGCGGCGACGGCCCCGGGCCC
GGAGATGGTGGAGCAGAGGGGCCCGGGGAGGCCCCGCAGCGACGGGGAGAACGTGTTTGCTGGGCAGTCAAAGATCTATG
CCTACATGAGTCCGAACAAGTGCTCTGCAATGCGCTCTCCACTTCAGGAAGAGAACTCGGTTGCCCATCATGAGGTCAAA
TGCCCGGGGAAACCATTAGCTGGAATCTACAGGAAGCGAGAAGAGAAAAGGAACACCGGGAACGTTATACGAAGCGCTGT
GAAGTCAGATGAACAGAAGAGCAAAGACACCAGGAGAGGTCCCCTGGCGCCTTTTCCAAACCAAAAATCCGAAGCAGCAG
AACCTCCAAAAACTCCACCCCCATCATGTGATTCTACCAATGTAGCAGTCGCTAAGCAAGCCCTGAAAAAGTCCCTCAAG
GGCAAACAGGCCCCTCGGAAAAAGTCTCAAGGGAAAACCCAGCAGAATAGAAAACTCACAGATTTCTACCCTGTGCGGAG
GAGTTCCCGGAAGAGCAAAGCTGAGCTGCAGTCTGAAGAAAGGAAGAAAATAGATGAGCTGATTGAGAGCGGGAAGGAAG
AAGGCATGAAGATTGATCTAATTGATGGCAAAGGCAGGGGTGTGATCGCTACCAAGCAGTTCTCCAGGGGAGACTTTGTG
GTAGAATACCATGGGGACCTCATTGAAATCACTGATGCCAAGAAGCGGGAGGCTCTGTACGCACAGGACCCCTCCACTGG
CTGCTACATGTACTATTTTCAGTATCTGAGCAAAACCTACTGCGTGGATGCCACTCAAGAAACGAACCGCCTAGGGAGAC
TCATCAATCACAGTAAGTGTGGGAACTGCCAGACCAAACTGCACGACATCGACGGCGTGCCTCACCTCATCCTCATCGCC
TCCCGAGACATCGCAGCTGGGGAGGAGCTCCTGTACGACTATGGGGACCGAAGCAAGGCCTCCATCGAAGCCTACCCCTG
GCTGAAGCACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 32 .47 RPM |
| SRP007412_cerebellum | 33 .48 RPM |
| SRP007412_heart | 156 .02 RPM |
| SRP007412_kidney | 93 .32 RPM |
| SRP007412_liver | 30 .26 RPM |
| SRP007412_testis | 31 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000183955 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000013514 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000031093 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005085 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000005598 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000001062 | ortholog_one2many | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000015376 | ortholog_one2many | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000015884 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1459 | 81.82 | 90.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_3478 | 78.80 | 93.96 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000049327 retrocopies