Parental gene:

Hspa5, ENSMUSG00000026864

Aliases:Hspa5, AL022860, AU019543, Bip, D2Wsu141e, D2Wsu17e, Grp78, Hsce70, SEZ-7, Sez7, baffled, mBiP
Description:heat shock protein 5 [Source:MGI Symbol;Acc:MGI:95835]
Organism:Mouse (Mus musculus)
Coordinates:2:34771969..34776531(+)


>ENSMUSG00000026864
ATGATGAAGTTCACTGTGGTGGCGGCGGCGTTGCTGCTGCTGGGCGCGGTGCGGGCCGAGGAGGAGGACAAGAAGGAGGA
TGTGGGCACGGTGGTCGGCATCGACTTGGGGACCACCTATTCCTGCGTCGGTGTGTTCAAGAACGGCCGCGTGGAGATCA
TAGCCAACGATCAGGGCAACCGCATCACGCCGTCGTATGTGGCCTTCACTCCTGAAGGGGAGCGTCTGATTGGCGATGCG
GCCAAGAACCAACTCACGTCCAACCCCGAGAACACGGTCTTCGATGCCAAGCGCCTCATCGGACGCACTTGGAATGACCC
TTCGGTGCAGCAGGACATCAAGTTCTTGCCATTCAAGGTGGTTGAAAAGAAAACTAAACCGTACATTCAAGTTGATATTG
GAGGTGGGCAAACCAAGACATTTGCCCCAGAAGAAATTTCTGCCATGGTTCTCACTAAAATGAAGGAGACTGCTGAGGCG
TATTTGGGAAAGAAGGTTACCCATGCAGTTGTTACTGTACCAGCTTACTTCAATGATGCCCAGCGACAAGCAACCAAAGA
TGCTGGCACTATTGCTGGACTGAATGTCATGAGGATCATCAATGAGCCTACAGCAGCTGCTATTGCATATGGCCTGGATA
AGAGAGAGGGAGAGAAGAACATCCTTGTGTTTGACCTGGGTGGCGGCACCTTCGATGTGTCTCTTCTCACCATTGACAAT
GGTGTCTTTGAAGTGGTGGCCACTAATGGAGATACTCACCTGGGTGGGGAAGACTTTGATCAGCGGGTCATGGAACACTT
CATCAAGTTGTACAAAAAGAAAACTGGTAAAGATGTTAGGAAAGACAACAGAGCTGTGCAGAAACTCCGGCGTGAGGTAG
AAAAGGCTAAGAGAGCCTTGTCTTCTCAGCATCAAGCAAGGATTGAAATTGAGTCCTTCTTCGAAGGAGAAGACTTCTCA
GAGACCCTTACTCGGGCCAAATTTGAAGAGCTGAACATGGACCTGTTCCGCTCTACCATGAAGCCTGTCCAGAAAGTGTT
GGAAGACTCTGATCTGAAGAAATCTGATATTGATGAAATTGTTCTGGTTGGTGGATCTACTCGAATTCCAAAGATTCAGC
AACTGGTGAAAGAGTTCTTCAATGGCAAGGAGCCATCCCGTGGCATAAACCCCGATGAGGCTGTAGCCTATGGTGCCGCT
GTCCAGGCTGGTGTCCTCTCTGGTGATCAGGATACAGGTGATCTGGTACTGCTTGATGTTTGTCCCCTTACACTTGGTAT
TGAAACTGTGGGAGGAGTCATGACAAAACTGATTCCAAGGAACACTGTGGTACCCACCAAGAAGTCTCAGATCTTCTCCA
CGGCTTCCGATAATCAGCCAACTGTAACAATCAAGGTCTATGAAGGTGAACGACCCCTAACAAAAGACAATCATCTTCTG
GGTACATTTGATCTGACTGGAATTCCTCCTGCTCCCCGTGGAGTTCCCCAGATTGAAGTCACTTTTGAGATAGATGTTAA
TGGTATTCTCCGAGTGACAGCTGAAGACAAAGGTACAGGAAACAAAAACAAAATCACAATTACCAATGACCAAAACCGCC
TGACACCTGAAGAAATTGAAAGGATGGTTAATGATGCTGAGAAGTTTGCTGAGGAAGACAAAAAGCTCAAAGAGCGCATT
GACACCAGGAATGAATTGGAAAGCTATGCTTATTCTCTCAAGAACCAGATTGGAGATAAAGAAAAGCTGGGAGGTAAACT
TTCTTCTGAAGATAAAGAAACCATGGAAAAAGCTGTAGAGGAAAAGATTGAATGGCTGGAAAGCCACCAGGATGCGGACA
TTGAAGACTTTAAAGCCAAAAAGAAGGAACTAGAAGAAATTGTTCAGCCAATTATCAGCAAACTCTATGGAAGTGGAGGC
CCTCCCCCAACTGGTGAAGAGGATACATCAGAAAAAGATGAGTTGTAG

Library Parental gene expression (RPM)
SRP007412_brain 254 .63 RPM
SRP007412_cerebellum 314 .11 RPM
SRP007412_heart 480 .28 RPM
SRP007412_kidney 534 .24 RPM
SRP007412_liver 808 .28 RPM
SRP007412_testis 401 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006880 ortholog_one2one 1 retrogene
retro_cjac_2221,
Homo sapiens ENSG00000044574 ortholog_one2one 1 retrogene
retro_hsap_3005,
Gallus gallus ENSGALG00000001000 ortholog_one2one 1 retrogene
retro_ggal_21,
Gorilla gorilla ENSGGOG00000026879 ortholog_one2one 1 retrogene
retro_ggor_2082,
Macropus eugenii ENSMEUG00000016702 ortholog_one2one 1 retrogene
retro_meug_522,
Mus musculus ENSMUSG00000015656 within_species_paralog 8 retrogenes
retro_mmus_2244, retro_mmus_2584, retro_mmus_26, retro_mmus_2621, retro_mmus_2840, retro_mmus_316, retro_mmus_351, retro_mmus_620,
Mus musculus ENSMUSG00000024359 within_species_paralog 1 retrogene
retro_mmus_3624,
Nomascus leucogenys ENSNLEG00000017348 ortholog_one2one 1 retrogene
retro_nleu_751,
Otolemur garnettii ENSOGAG00000006786 ortholog_one2one 1 retrogene
retro_ogar_2901,
Pongo abelii ENSPPYG00000019609 ortholog_one2one 1 retrogene
retro_pabe_2491,
Pan troglodytes ENSPTRG00000000563 ortholog_one2one 1 retrogene
retro_ptro_2033,
Ictidomys tridecemlineatus ENSSTOG00000011243 ortholog_one2one 4 retrogenes
retro_itri_1686, retro_itri_1687, retro_itri_1689, retro_itri_1879,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1299 62.66 93.44
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Download FASTA sequences of all ENSMUSG00000026864 retrocopies