Parental gene: | Rps23, ENSMUSG00000049517 |
| Aliases: | None |
| Description: | ribosomal protein S23 [Source:MGI Symbol;Acc:MGI:1913725] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 13:90923130..90924942(+) |
>ENSMUSG00000049517
ATGGGCAAGTGTCGTGGTCTCCGAACTGCCCGGAAGCTCCGCAGTCACCGACGGGACCAGAAGTGGCATGACAAACAGTA
CAAGAAAGCCCACTTGGGCACAGCCCTGAAGGCCAATCCGTTTGGGGGTGCCTCTCATGCAAAGGGAATTGTGCTGGAAA
AAGTAGGGGTTGAGGCCAAACAGCCAAATTCTGCCATCAGGAAGTGCGTCAGGGTGCAGCTCATTAAGAACGGGAAGAAG
ATCACAGCGTTCGTGCCCAATGATGGCTGCCTGAACTTCATTGAGGAAAATGATGAAGTTCTGGTTGCTGGATTTGGTCG
AAAAGGTCATGCTGTAGGTGATATTCCTGGAGTCCGCTTTAAGGTGGTTAAAGTAGCCAATGTTTCTCTGTTGGCTCTAT
ACAAAGGCAAGAAAGAAAGGCCAAGATCATAA
ATGGGCAAGTGTCGTGGTCTCCGAACTGCCCGGAAGCTCCGCAGTCACCGACGGGACCAGAAGTGGCATGACAAACAGTA
CAAGAAAGCCCACTTGGGCACAGCCCTGAAGGCCAATCCGTTTGGGGGTGCCTCTCATGCAAAGGGAATTGTGCTGGAAA
AAGTAGGGGTTGAGGCCAAACAGCCAAATTCTGCCATCAGGAAGTGCGTCAGGGTGCAGCTCATTAAGAACGGGAAGAAG
ATCACAGCGTTCGTGCCCAATGATGGCTGCCTGAACTTCATTGAGGAAAATGATGAAGTTCTGGTTGCTGGATTTGGTCG
AAAAGGTCATGCTGTAGGTGATATTCCTGGAGTCCGCTTTAAGGTGGTTAAAGTAGCCAATGTTTCTCTGTTGGCTCTAT
ACAAAGGCAAGAAAGAAAGGCCAAGATCATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 40 .46 RPM |
| SRP007412_cerebellum | 22 .32 RPM |
| SRP007412_heart | 60 .70 RPM |
| SRP007412_kidney | 58 .10 RPM |
| SRP007412_liver | 55 .65 RPM |
| SRP007412_testis | 38 .47 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000011136 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000013358 | possible_ortholog | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000011247 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000003578 | possible_ortholog | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000015608 | ortholog_one2one | 7 retrogenes | |
| Rattus norvegicus | ENSRNOG00000016580 | ortholog_one2one | 12 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000008347 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000014491 | ortholog_one2one | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_323 | 97.22 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_365 | 95.80 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_836 | 96.40 | 76.22 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_848 | 97.92 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_2151 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmus_2200 | 83.10 | 99.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmus_2690 | 90.55 | 88.81 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_mmus_2812 | 77.93 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_mmus_3118 | 98.60 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_mmus_3163 | 93.79 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_mmus_3168 | 99.30 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_mmus_3619 | 96.50 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000049517 retrocopies