RetrogeneDB ID: | retro_ttru_186 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1513:242587..242904(+) | ||
Located in intron of: | ENSTTRG00000011479 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS23 | ||
Ensembl ID: | ENSTTRG00000014491 | ||
Aliases: | None | ||
Description: | ribosomal protein S23 [Source:HGNC Symbol;Acc:10410] |
Percent Identity: | 86.92 % |
Parental protein coverage: | 60.92 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | LLSFAQVPGAGSMGKCRGLRTARKLRSHRRDQKWHDKQYKKAHL-GTALKANPFGGASHAKGIVLEKVGV |
..SF.Q..GAG.MGKC..LRT.RKL.SHRRD.KWH.KQYKKAHL.GTALKANPFGGASHAKGIVLEKVGV | |
Retrocopy | VVSFTQARGAGRMGKCCSLRTTRKLHSHRRD*KWHYKQYKKAHL<GTALKANPFGGASHAKGIVLEKVGV |
Parental | EAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFI |
EAKQPNSAIRKCVRVQLIKNGKKI.AFVPNDGCLNFI | |
Retrocopy | EAKQPNSAIRKCVRVQLIKNGKKIRAFVPNDGCLNFI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |