RetrogeneDB ID: | retro_shar_348 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL841420.1:992846..993269(-) | ||
Located in intron of: | ENSSHAG00000012186 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSHAG00000008347 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.44 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 0 |
Parental | MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV |
MGKC.G...A.KL..HRRDQK.H.K..KKAH.GTALK.N..G.ASH.KGIVLEKVGVE.KQPNSAIRK.. | |
Retrocopy | MGKCQGFYAAKKLQNHRRDQK*HNK**KKAHAGTALKVNLCGEASHTKGIVLEKVGVEVKQPNSAIRKYM |
Parental | RVQLIKN-GKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKE |
RV.LIKN.....T.FVPN.GCLNFIEE.D.VLVAGF..K.H....I..V.FKVVKVANVSLL...KGKKE | |
Retrocopy | RV*LIKNDXXXXTVFVPNIGCLNFIEESDIVLVAGFVQKSH---NISKVCFKVVKVANVSLLVFCKGKKE |
Parental | RPRS |
R.RS | |
Retrocopy | RSRS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |