RetrogeneDB ID: | retro_ttru_1253 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_108765:356368..356819(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS23 | ||
Ensembl ID: | ENSTTRG00000014491 | ||
Aliases: | None | ||
Description: | ribosomal protein S23 [Source:HGNC Symbol;Acc:10410] |
Percent Identity: | 67.97 % |
Parental protein coverage: | 86.78 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | LLSFAQVPGAGSMGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLE-KVGV |
L.SF.Q..G.G.MGKCRGLRTARKL.SHRRDQKWHDKQYKKAH.GTALKA.PFGGASHAKG.V.E.KVG. | |
Retrocopy | LYSFVQARGTGRMGKCRGLRTARKLCSHRRDQKWHDKQYKKAHVGTALKASPFGGASHAKGTVFE<KVGL |
Parental | EAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGV-RFKVVKVA |
...........C............TAFVP.DGCLNF.E.NDEVLVAGFG.KGHAVGDIPGV.RFK.V.VA | |
Retrocopy | KPNSQILPSERCQDSAHQEWXXXXTAFVPYDGCLNFTEQNDEVLVAGFGCKGHAVGDIPGV<RFKIVEVA |
Parental | NVSLLALYKGKKE |
NVSLL.....KK. | |
Retrocopy | NVSLLLIQGRKKD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |