Parental gene: | Tceb2, ENSMUSG00000055839 |
| Aliases: | Tceb2, 0610040H15Rik |
| Description: | transcription elongation factor B (SIII), polypeptide 2 [Source:MGI Symbol;Acc:MGI:1914923] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 17:23824739..23829109(-) |
>ENSMUSG00000055839
ATGGACGTGTTTCTCATGATCCGGCGCCACAAGACCACCATCTTTACGGACGCCAAGGAGTCGAGCACCGTGTTCGAACT
GAAGCGCATCGTCGAGGGCATCCTCAAGCGGCCGCCAGAGGAGCAGCGGCTTTACAAGGATGACCAGCTCCTTGATGATG
GCAAAACTCTGGGCGAGTGTGGCTTCACTAGCCAGACAGCACGGCCACAGGCCCCAGCCACAGTGGGCCTGGCCTTCCGA
GCAGATGACACCTTCGAAGCTCTCCGCATCGAGCCCTTTTCCAGCCCTCCAGAGCTTCCAGATGTGATGAAGCCACAGGA
TTCTGGAGGCAGTGCCAATGAACAAGCTGTGCAGTGA
ATGGACGTGTTTCTCATGATCCGGCGCCACAAGACCACCATCTTTACGGACGCCAAGGAGTCGAGCACCGTGTTCGAACT
GAAGCGCATCGTCGAGGGCATCCTCAAGCGGCCGCCAGAGGAGCAGCGGCTTTACAAGGATGACCAGCTCCTTGATGATG
GCAAAACTCTGGGCGAGTGTGGCTTCACTAGCCAGACAGCACGGCCACAGGCCCCAGCCACAGTGGGCCTGGCCTTCCGA
GCAGATGACACCTTCGAAGCTCTCCGCATCGAGCCCTTTTCCAGCCCTCCAGAGCTTCCAGATGTGATGAAGCCACAGGA
TTCTGGAGGCAGTGCCAATGAACAAGCTGTGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 34 .18 RPM |
| SRP007412_cerebellum | 20 .36 RPM |
| SRP007412_heart | 27 .80 RPM |
| SRP007412_kidney | 19 .50 RPM |
| SRP007412_liver | 14 .88 RPM |
| SRP007412_testis | 71 .72 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019543 | ortholog_one2many | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000015347 | ortholog_one2one | 10 retrogenes | |
| Cavia porcellus | ENSCPOG00000021024 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000004711 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000103363 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015306 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000016536 | ortholog_one2many | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000015265 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009471 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000010116 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000007013 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007663 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000004814 | ortholog_one2many | 6 retrogenes | |
| Sus scrofa | ENSSSCG00000008061 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_99 | 70.18 | 96.61 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_511 | 61.16 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_747 | 92.37 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_1212 | 90.68 | 99.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_1489 | 72.27 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmus_1664 | 96.61 | 99.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmus_2930 | 72.65 | 99.15 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000055839 retrocopies