Parental gene: | Tceb2, ENSRNOG00000004814 |
| Aliases: | None |
| Description: | Transcription elongation factor B polypeptide 2 [Source:UniProtKB/Swiss-Prot;Acc:P62870] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 10:12983020..12988206(-) |
>ENSRNOG00000004814
ATGGACGTGTTTCTCATGATCCGGCGCCACAAGACCACCATCTTTACGGACGCCAAGGAGTCGAGCACGGTGTTCGAACT
GAAGCGCATCGTCGAGGGCATCCTCAAGCGGCCGCCAGAGGAGCAGCGGCTGTACAAGGACGACCAGCTCCTTGATGATG
GAAAAACTCTGGGCGAATGTGGCTTCACCAGTCAGACAGCAAGGCCACAGGCCCCAGCCACAGTGGGCCTGGCCTTTCGA
GCAGATGACACCTTTGAAGCGCTGCGTATTGAACCCTTCTCCAGCCCTCCGGAGCTTCCAGATGTGATGAAGCCACAGGA
TTCTGGAGGCAGTGCCAATGAACAAGCTGTGCAGTGA
ATGGACGTGTTTCTCATGATCCGGCGCCACAAGACCACCATCTTTACGGACGCCAAGGAGTCGAGCACGGTGTTCGAACT
GAAGCGCATCGTCGAGGGCATCCTCAAGCGGCCGCCAGAGGAGCAGCGGCTGTACAAGGACGACCAGCTCCTTGATGATG
GAAAAACTCTGGGCGAATGTGGCTTCACCAGTCAGACAGCAAGGCCACAGGCCCCAGCCACAGTGGGCCTGGCCTTTCGA
GCAGATGACACCTTTGAAGCGCTGCGTATTGAACCCTTCTCCAGCCCTCCGGAGCTTCCAGATGTGATGAAGCCACAGGA
TTCTGGAGGCAGTGCCAATGAACAAGCTGTGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 18 .62 RPM |
| SRP017611_kidney | 25 .47 RPM |
| SRP017611_brain | 27 .10 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019543 | ortholog_many2many | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000015347 | ortholog_one2many | 10 retrogenes | |
| Cavia porcellus | ENSCPOG00000021024 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000004711 | ortholog_many2many | 2 retrogenes | |
| Homo sapiens | ENSG00000103363 | ortholog_one2many | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015306 | ortholog_many2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000016536 | ortholog_many2many | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000015265 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000055839 | ortholog_one2many | 7 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000009471 | ortholog_many2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000010116 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000007013 | ortholog_many2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007663 | ortholog_many2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000008061 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000015454 | possible_ortholog | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_35 | 97.44 | 99.15 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_185 | 69.72 | 92.37 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_352 | 92.24 | 98.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_1226 | 87.64 | 74.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_rnor_1275 | 78.00 | 83.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_rnor_1948 | 83.62 | 98.31 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000004814 retrocopies