Parental gene:

ENSOPRG00000016593

Aliases:None
Description:None
Organism:Southern American pika (Ochotona princeps)
Coordinates:scaffold_31699:35022..36462(-)


>ENSOPRG00000016593
CCTGTATCACGTGGAAGAGACAGTTACGGCGGCCCGCCTCGAAGGGAACCCCTGCCCTCTCGCAGAGATGTGTATTTGTC
ACCCAGAGATGATGGATACTCCACGAAAGACAGCTATTCCAGCAGAGATTACCCAAGTTCCCGTGATACCCGAGATTACG
CACCCCCACCAAGAGACTATACTTACCGTGATTATGGTCATTCCAGTTCACGTGACGACTATCCATCCAGAGGTTATAGT
GACAGAGATGGCTATGGTCGTGATCGGGACTATTCAGATCATCCGAGCGGAGGCTCCTATCGAGATTCCTATGAGAGCTA
TGGTAACTCACGTAGTGCTCCACCTACACGAGGGCCCCCGCCATCTTATGGTGGAAGCAGTCGCTATGATGATTACAGCA
GCTCACGTGACGGATATGGTGGAAGTCGAGACAGTTACTCAAGCAGCCGAAGTGATCTCTACTCAAGTGGTCGTGATCGG
GTTGGCAGACAAGAAAGAGGGCTTCCTCCTTCTATGGAAAGGGGGTACCCTCCTCCACGTGATTCCTACAGCAGTTCAAG
CCGCGGAGCACCAAGAGGTGGTGGCCGTGGAGGAAACCGATCTGATAGAGGGGGAGGCAGAAGCAGATACTAG

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000018962 possible_ortholog 4 retrogenes
retro_cfam_1106, retro_cfam_1244, retro_cfam_1649, retro_cfam_1914,
Choloepus hoffmanni ENSCHOG00000012369 ortholog_one2one 3 retrogenes
retro_chof_1240, retro_chof_2596, retro_chof_880,
Dipodomys ordii ENSDORG00000015481 ortholog_one2one 1 retrogene
retro_dord_793,
Echinops telfairi ENSETEG00000013178 ortholog_one2one 1 retrogene
retro_etel_1952,
Homo sapiens ENSG00000147274 possible_ortholog 7 retrogenes
retro_hsap_23, retro_hsap_3074, retro_hsap_3587, retro_hsap_4144, retro_hsap_4846, retro_hsap_800, retro_hsap_91,
Gorilla gorilla ENSGGOG00000006944 ortholog_one2one 1 retrogene
retro_ggor_657,
Loxodonta africana ENSLAFG00000005568 possible_ortholog 3 retrogenes
retro_lafr_1188, retro_lafr_276, retro_lafr_35,
Myotis lucifugus ENSMLUG00000013209 possible_ortholog 5 retrogenes
retro_mluc_1630, retro_mluc_1746, retro_mluc_203, retro_mluc_2180, retro_mluc_80,
Mustela putorius furo ENSMPUG00000001855 possible_ortholog 2 retrogenes
retro_mputfur_1539, retro_mputfur_956,
Mus musculus ENSMUSG00000031134 possible_ortholog 2 retrogenes
retro_mmus_170, retro_mmus_187,
Oryctolagus cuniculus ENSOCUG00000007220 possible_ortholog 1 retrogene
retro_ocun_3,
Ochotona princeps ENSOPRG00000007990 within_species_paralog 2 retrogenes
retro_opri_24, retro_opri_930,
Pongo abelii ENSPPYG00000020771 possible_ortholog 3 retrogenes
retro_pabe_2548, retro_pabe_303, retro_pabe_766,
Rattus norvegicus ENSRNOG00000000866 possible_ortholog 1 retrogene
retro_rnor_268,
Sorex araneus ENSSARG00000000397 ortholog_one2one 1 retrogene
retro_sara_169,
Tursiops truncatus ENSTTRG00000007322 possible_ortholog 1 retrogene
retro_ttru_1450,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_372 68.85 84.76
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Download FASTA sequences of all ENSOPRG00000016593 retrocopies