RetrogeneDB ID: | retro_ttru_1450 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_113570:135506..136679(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RBMX | ||
Ensembl ID: | ENSTTRG00000007322 | ||
Aliases: | None | ||
Description: | RNA binding motif protein, X-linked [Source:HGNC Symbol;Acc:9910] |
Percent Identity: | 96.42 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMN |
MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMN | |
Retrocopy | MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMN |
Parental | GKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFNM |
G.SLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGL..........RGPPS.GGHMDDGGYSMNFNM | |
Retrocopy | GMSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLXXXXXXXXXXRGPPSHGGHMDDGGYSMNFNM |
Parental | SSSRGPLPVKRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPR |
SSSRGPLPVKRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPR | |
Retrocopy | SSSRGPLPVKRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPR |
Parental | DDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYSDRDGYGRDRDYSDHPSGGS |
DDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYS.RDGYGRDRDYSDHPSGGS | |
Retrocopy | DDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYSGRDGYGRDRDYSDHPSGGS |
Parental | YRDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSGRDRVGRQERGLP |
YRDSYESYGNS.SAPPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSGRDRVGRQERGLP | |
Retrocopy | YRDSYESYGNSHSAPPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSGRDRVGRQERGLP |
Parental | PSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY |
PSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY | |
Retrocopy | PSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |