RetrogeneDB ID: | retro_mputfur_956 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896981.1:599002..600180(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RBMX | ||
Ensembl ID: | ENSMPUG00000001855 | ||
Aliases: | None | ||
Description: | RNA binding motif protein, X-linked [Source:HGNC Symbol;Acc:9910] |
Percent Identity: | 70.85 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 7 |
Number of frameshifts detected | 6 |
Parental | KMVEADRPGKLFIGGLN-TETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAK-DAAR |
K.VE.D.PGKL.IGGL..TETN..ALE..FGKYG.I.EVLLMKD.ETNKSR.FAFV.FESPA.AK.D.A. | |
Retrocopy | KLVEPDHPGKLCIGGLK<TETNKEALEVIFGKYGQIIEVLLMKDHETNKSRAFAFVMFESPAEAK>DTAK |
Parental | DMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGT-RGPPSRGGHMDDGGYSM |
D.N.KSLDGKAIKVEQAT.PSF.SGR.GPP.P.RSR.PP.GLR.GR..SGGT.RGPPS....MD.GGYS. | |
Retrocopy | DVNRKSLDGKAIKVEQATEPSFGSGRYGPPSPLRSRSPPKGLRAGRR*SGGT>RGPPSCKRPMDHGGYSV |
Parental | NFNMSSSRGPLPVKRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVY |
.FN..SS.GPLP.KRGP.P.SG.PPPKR.APSG.V....GM.G.APV..GRDS.GG.....PLPS.RDVY | |
Retrocopy | IFNINSSKGPLPIKRGPLPQSGCPPPKRYAPSGQVHINNGMEGKAPVQHGRDS*GGKT*KKPLPSHRDVY |
Parental | LSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPR-DYTYRDYGHSSSRDDYPSRGYSDRDGYGRDRDYSDH |
LSP.DDGYSTKDSYS.RD.PSS.DTRD...PPR.DYTY.DYGHSSS.DDYPSRG.S.RD.YG.D..Y.DH | |
Retrocopy | LSPKDDGYSTKDSYSMRDFPSSCDTRD*VLPPR>DYTYCDYGHSSSHDDYPSRGCSIRDDYGPDLNYLDH |
Parental | PSGGSYRDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSGRDRVGRQ |
.SG.SY.D.YESYGNS.SA..T.GP.PS..G.S..DDYSSS.DGYGGS.DSYS.S.SDLYS.G.D..GRQ | |
Retrocopy | TSGSSYGD*YESYGNSLSALTT*GPLPSCRGNSHCDDYSSSYDGYGGSQDSYSGSGSDLYSRGHDLAGRQ |
Parental | ERGLPPSME-RGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGG-GRSRY |
ERGLPPS.E.R.YPPP.DSY..S...APRGG..GGS.SDRG..GRSRY | |
Retrocopy | ERGLPPSVE>RRYPPPCDSYTTSIHRAPRGGSYGGS*SDRGE<GRSRY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |