RetrogeneDB ID: | retro_chof_2596 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_8917:2485..3301(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000012369 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 95.96 % |
Parental protein coverage: | 96.11 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | RGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPPPKRSAPSGPVRSNSGMGGRAPVSRGRDS |
RGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPPPKRSAPSGPVRSNSGMGGRAPVSRGRDS | |
Retrocopy | RGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPPPKRSAPSGPVRSNSGMGGRAPVSRGRDS |
Parental | YGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRG |
YGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRG | |
Retrocopy | YGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRG |
Parental | YSDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSS |
YSDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPPTRGPPPSYGGSSRYDDY..S.D.YGGSRDSYSS | |
Retrocopy | YSDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYNNSYDRYGGSRDSYSS |
Parental | SRSDLYSSGRDRVGRQERGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY |
S.SDLYSSGRDRVGRQE.GLPPSMER.YPPPRDSYSSSS.GAPRGGG.GGS.SDRG.GRSRY | |
Retrocopy | S*SDLYSSGRDRVGRQEKGLPPSMEREYPPPRDSYSSSSCGAPRGGGCGGSQSDRGQGRSRY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |