Parental gene:

ENSCHOG00000012369

Aliases:None
Description:None
Organism:Sloth (Choloepus hoffmanni)
Coordinates:scaffold_95230:4269..6700(-)


>ENSCHOG00000012369
CTTAGAGGTGGAAGAGGAGGAAGTGGAGGAACAAGGGGACCTCCTTCACGTGGAGGGCACATGGATGATGGTGGCTATTC
CATGAATTTTAACATGAGTTCTTCCAGGGGACCACTTCCAGTGAAAAGAGGCCCACCACCACGAAGTGGGGGCCCTCCTC
CCAAAAGATCTGCCCCCTCCGGACCAGTTCGCAGCAACAGTGGAATGGGAGGAAGAGCTCCTGTATCACGTGGAAGAGAT
AGCTATGGAGGCCCACCACGAAGGGAACCCCTGCCCTCTCGTAGAGATGTTTATTTGTCTCCAAGAGATGATGGATATTC
TACTAAAGACAGCTATTCAAGCAGAGATTACCCAAGTTCTCGTGATACAAGAGATTATGCACCACCACCAAGAGATTATA
CATATCGTGATTATGGTCATTCCAGTTCACGTGATGACTATCCATCAAGAGGCTATAGTGATAGAGATGGCTATGGTCGT
GATCGAGACTATTCAGATCATCCGAGTGGAGGGTCCTACAGAGATTCATATGAGAGTTATGGTAACTCACGTAGTGCTCC
ACCTACACGAGGGCCCCCGCCATCTTATGGTGGAAGCAGTCGCTATGATGATTACAGCAGCTCACGTGACGGATATGGTG
GAAGTCGTGACAGTTACTCAAGCAGCCGAAGTGATCTCTACTCAAGTGGTCGTGATCGTGTTGGCAGACAAGAAAGAGGG
CTTCCCCCTTCTATGGAAAGGGGGTACCCTCCTCCACGTGATTCCTACAGCAGTTCAAGCCGCGGAGCACCAAGAGGTGG
TGGCCGTGGAGGAAGCCGATCTGATAGAGGGGGAGGCAGAAGCAGATACTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013308 ortholog_one2one 1 retrogene
retro_btau_36,
Canis familiaris ENSCAFG00000018962 possible_ortholog 4 retrogenes
retro_cfam_1106, retro_cfam_1244, retro_cfam_1649, retro_cfam_1914,
Choloepus hoffmanni ENSCHOG00000001130 within_species_paralog 1 retrogene
retro_chof_974,
Cavia porcellus ENSCPOG00000012164 ortholog_one2one 1 retrogene
retro_cpor_778,
Dipodomys ordii ENSDORG00000015481 ortholog_one2one 1 retrogene
retro_dord_793,
Echinops telfairi ENSETEG00000013178 ortholog_one2one 1 retrogene
retro_etel_1952,
Homo sapiens ENSG00000147274 possible_ortholog 7 retrogenes
retro_hsap_23, retro_hsap_3074, retro_hsap_3587, retro_hsap_4144, retro_hsap_4846, retro_hsap_800, retro_hsap_91,
Gorilla gorilla ENSGGOG00000006944 ortholog_one2many 1 retrogene
retro_ggor_657,
Loxodonta africana ENSLAFG00000005568 possible_ortholog 3 retrogenes
retro_lafr_1188, retro_lafr_276, retro_lafr_35,
Myotis lucifugus ENSMLUG00000013209 possible_ortholog 5 retrogenes
retro_mluc_1630, retro_mluc_1746, retro_mluc_203, retro_mluc_2180, retro_mluc_80,
Mustela putorius furo ENSMPUG00000001855 possible_ortholog 2 retrogenes
retro_mputfur_1539, retro_mputfur_956,
Mus musculus ENSMUSG00000031134 possible_ortholog 2 retrogenes
retro_mmus_170, retro_mmus_187,
Oryctolagus cuniculus ENSOCUG00000007220 possible_ortholog 1 retrogene
retro_ocun_3,
Otolemur garnettii ENSOGAG00000007839 ortholog_one2one 5 retrogenes
retro_ogar_1057, retro_ogar_137, retro_ogar_1586, retro_ogar_2445, retro_ogar_2584,
Ochotona princeps ENSOPRG00000016593 ortholog_one2one 1 retrogene
retro_opri_372,
Pongo abelii ENSPPYG00000020771 possible_ortholog 3 retrogenes
retro_pabe_2548, retro_pabe_303, retro_pabe_766,
Rattus norvegicus ENSRNOG00000000866 possible_ortholog 1 retrogene
retro_rnor_268,
Sorex araneus ENSSARG00000000397 ortholog_one2one 1 retrogene
retro_sara_169,
Tarsius syrichta ENSTSYG00000009555 ortholog_one2one 1 retrogene
retro_tsyr_15,
Tursiops truncatus ENSTTRG00000007322 possible_ortholog 1 retrogene
retro_ttru_1450,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_880 65.40 90.81
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2. retro_chof_1240 71.86 80.21
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3. retro_chof_2596 95.96 96.11
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Download FASTA sequences of all ENSCHOG00000012369 retrocopies