Parental gene: | MRPL35, ENSPPYG00000012214 |
| Aliases: | None |
| Description: | mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:14489] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 2a:23912901..23930521(-) |
>ENSPPYG00000012214
ATGGCTGCCTCTGCTTTTGCTGGTGCGGTGAGAGCAGCTTCAGGAATCCTACGGCCCTTGAATATTTTGGCATCTTCAAC
CTACCGCAACTGTGTCAAGAATGCCTCTCTTATTTCTGCATTGTCCACTGGACGTTTTAGTCATATTCAGACACCAGTTG
TTTCCTCCACTCCCAGACTTCCCACATCTGAGAGAAACCTGACATGTGGGCATACCTCAGTGATCCTTAATAGAGTGGCC
CCCGTGCTTCCAAGTGTCCTGAAGCTGCCAGTCAGATCTCTAACATACTTCAGTGCAAGAAAAGGCAAGAGAAAGACCGT
GAAAGCTGTCATCTATAGATTTCTTCGACTTCATTGTGGCCTTTGGGTGAGGAGAAAGGCTGGCTATAAGAAAAAATTAT
GGAAAAAGACACCTGCAAGGAAGAAGCGATTGAGGGAATTTGTATTCTGCAATAAAACCCAGAGTAAACTCTTAGATAAA
ATGACGACGTCCTTCTGGAAGAGGCGAAACTGCTCTACATGTTCCCATCCTCAAGAAATTGCGCCAAGAGTGAGCTACCT
GCCTGTCCCTGGAAAAGATTCAGAAGCTCCTAATCCAGAATCCAGGGAGGAGATGAGCTTCCTGTGA
ATGGCTGCCTCTGCTTTTGCTGGTGCGGTGAGAGCAGCTTCAGGAATCCTACGGCCCTTGAATATTTTGGCATCTTCAAC
CTACCGCAACTGTGTCAAGAATGCCTCTCTTATTTCTGCATTGTCCACTGGACGTTTTAGTCATATTCAGACACCAGTTG
TTTCCTCCACTCCCAGACTTCCCACATCTGAGAGAAACCTGACATGTGGGCATACCTCAGTGATCCTTAATAGAGTGGCC
CCCGTGCTTCCAAGTGTCCTGAAGCTGCCAGTCAGATCTCTAACATACTTCAGTGCAAGAAAAGGCAAGAGAAAGACCGT
GAAAGCTGTCATCTATAGATTTCTTCGACTTCATTGTGGCCTTTGGGTGAGGAGAAAGGCTGGCTATAAGAAAAAATTAT
GGAAAAAGACACCTGCAAGGAAGAAGCGATTGAGGGAATTTGTATTCTGCAATAAAACCCAGAGTAAACTCTTAGATAAA
ATGACGACGTCCTTCTGGAAGAGGCGAAACTGCTCTACATGTTCCCATCCTCAAGAAATTGCGCCAAGAGTGAGCTACCT
GCCTGTCCCTGGAAAAGATTCAGAAGCTCCTAATCCAGAATCCAGGGAGGAGATGAGCTTCCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 14 .93 RPM |
| SRP007412_cerebellum | 10 .34 RPM |
| SRP007412_heart | 12 .34 RPM |
| SRP007412_kidney | 11 .57 RPM |
| SRP007412_liver | 10 .40 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000019467 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000008329 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000004773 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000052962 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002756 | ortholog_one2one | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000004048 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000008546 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000015366 | ortholog_one2one | 10 retrogenes | |
| Tarsius syrichta | ENSTSYG00000007713 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_541 | 88.95 | 81.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_595 | 88.30 | 81.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1817 | 93.53 | 81.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_2837 | 80.70 | 81.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_3724 | 80.70 | 81.73 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000012214 retrocopies