Parental gene:

Mrpl35, ENSRNOG00000008546

Aliases:None
Description:39S ribosomal protein L35, mitochondrial [Source:RefSeq peptide;Acc:NP_001100066]
Organism:Rat (Rattus norvegicus)
Coordinates:4:164516932..164524701(-)


>ENSRNOG00000008546
ATGGCGGCCTCCATCTTCATGGGCGCCGTGAGAGCTGCCTCAGGAATATTACGTCCCCTCAATGTCTCGGTTTCGTCAAC
CTATCGGAACTGTGCCAGGAATGCCTGTCTTAGTTCTGCGCTGCGCACCATTCCTTTTAGACATATTCAGACATCAGTTG
TTTCCTCTGCTCCAAGGCTTGTCAAGTCTGTCGGACACCTGGCATATGGGCACACGGCATCAGTCCTTAATAGAGTGGCC
ACATTGGTTCCCAGTGTCTTGAAGCCTCCGGTCAGAGCTCTGACGTACTGCAGTGCACGGAAAGGAAAGAGAAAGACAGT
GAAGTCGGTTGTGCATCGCTTCCTCCGACTTCACTCTGGCCTTTGGCTAAGGAGAAAGGCTGGCTATAAGAAAAAATTAT
GGAAAAAGTCAACTGCAAGAAAGAAGCGCTTGAGGGAATTCGTGTTCTGCAATAAGACCCAGAGTAAACTCCTAGATAAA
ATGACGACATCTTTCTGGAAGAGGCGCAACTGGTACACTGGTGATCCCTACCAGATGTACCATGATCGGACAAACCTGCG
GGTATAG

Library Parental gene expression (RPM)
SRP017611_liver 12 .24 RPM
SRP017611_kidney 23 .24 RPM
SRP017611_brain 19 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000019467 ortholog_one2many 1 retrogene
retro_cjac_203,
Dasypus novemcinctus ENSDNOG00000008329 ortholog_one2one 1 retrogene
retro_dnov_404,
Homo sapiens ENSG00000132313 ortholog_one2one 4 retrogenes
retro_hsap_3424, retro_hsap_4784, retro_hsap_595, retro_hsap_681,
Gorilla gorilla ENSGGOG00000026769 ortholog_one2many 3 retrogenes
retro_ggor_2315, retro_ggor_2979, retro_ggor_526,
Macropus eugenii ENSMEUG00000004773 ortholog_one2one 1 retrogene
retro_meug_1703,
Mus musculus ENSMUSG00000052962 ortholog_one2one 1 retrogene
retro_mmus_1777,
Nomascus leucogenys ENSNLEG00000002756 ortholog_one2one 4 retrogenes
retro_nleu_1103, retro_nleu_1362, retro_nleu_2217, retro_nleu_781,
Otolemur garnettii ENSOGAG00000004048 ortholog_one2one 1 retrogene
retro_ogar_2600,
Pongo abelii ENSPPYG00000012214 ortholog_one2one 5 retrogenes
retro_pabe_1817, retro_pabe_2837, retro_pabe_3724, retro_pabe_541, retro_pabe_595,
Pan troglodytes ENSPTRG00000012152 ortholog_one2one 4 retrogenes
retro_ptro_2325, retro_ptro_3185, retro_ptro_438, retro_ptro_489,
Tupaia belangeri ENSTBEG00000015366 ortholog_one2one 10 retrogenes
retro_tbel_1143, retro_tbel_146, retro_tbel_2647, retro_tbel_289, retro_tbel_2892, retro_tbel_3789, retro_tbel_3828, retro_tbel_428, retro_tbel_4379, retro_tbel_627,
Tarsius syrichta ENSTSYG00000007713 ortholog_one2one 2 retrogenes
retro_tsyr_1128, retro_tsyr_264,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1399 53.39 61.70
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Download FASTA sequences of all ENSRNOG00000008546 retrocopies