Parental gene: | NRBF2, ENSPTRG00000002539 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 10:61509826..61531832(+) |
>ENSPTRG00000002539
ATGGAAGTAATGGAAGGACCCCTCAACCTGGCTCATCAACAGAGCAGACGAGCAGACCGTTTATTAGCTGCAGGCAAATA
CGAAGAGGCTATTTCTTGTCACAAAAAGGCTGCAGCGTATCTTTCTGAAGCCATGAAGCTGACACAGTCAGAGCAGGCTC
ATCTTTCACTGGAATTGCAAAGGGATAGCCATATGAAACAGCTCCTCCTCATCCAAGAGAGATGGAAAAGGGCCCAGCGT
GAAGAAAGATTGAAAGCCCAGCAGAACACAGACAAGGATGCAGCTGCCCATCTTCAGACATCTCACAAACCCTCTGCAGA
GGATGCAGAGGGCCAGAGTCCCCTTTCTCAGAAGTACAGCCCTTCCACAGAGAAATGCCTGCCTGAGATTCAGGGGATCT
TTGACAGGGATCCAGACACACTACTTTATTTACTTCAGCAAAAGAGTGAGCCAGCAGAGCCATGTATTGGAAGCAAAGCC
CCAAAAGATGATAAAACAATTATAGAGGAGCAGGCAACCAAAATTGCAGATTTGAAGAGGCATGTGGAATTCCTTGTGGC
TGAGAATGAAAGATTAAGGAAAGAAAATAAACAACTAAAGGCTGAAAAGGCCAGACTTCTAAAAGGTCCAATAGAAAAGG
AGCTGGATGTAGATGCTGATTTTGTAGAAACGTCAGAGTTATGGAGCTTGCCACCACATTCAGAAACTGCTACAGCCTCC
TCAACCTGGCAGAAGTTCGCAGCAAATACTGGGAAAGCCAAGGACATTCCAATCCCCAATCTTCCTCCCTTGGATTTTCC
ATCTCCAGAACTTCCTCTTATGGAGCTCTCTGAGGATATTCTGAAAGGATTTATGAATAATTAA
ATGGAAGTAATGGAAGGACCCCTCAACCTGGCTCATCAACAGAGCAGACGAGCAGACCGTTTATTAGCTGCAGGCAAATA
CGAAGAGGCTATTTCTTGTCACAAAAAGGCTGCAGCGTATCTTTCTGAAGCCATGAAGCTGACACAGTCAGAGCAGGCTC
ATCTTTCACTGGAATTGCAAAGGGATAGCCATATGAAACAGCTCCTCCTCATCCAAGAGAGATGGAAAAGGGCCCAGCGT
GAAGAAAGATTGAAAGCCCAGCAGAACACAGACAAGGATGCAGCTGCCCATCTTCAGACATCTCACAAACCCTCTGCAGA
GGATGCAGAGGGCCAGAGTCCCCTTTCTCAGAAGTACAGCCCTTCCACAGAGAAATGCCTGCCTGAGATTCAGGGGATCT
TTGACAGGGATCCAGACACACTACTTTATTTACTTCAGCAAAAGAGTGAGCCAGCAGAGCCATGTATTGGAAGCAAAGCC
CCAAAAGATGATAAAACAATTATAGAGGAGCAGGCAACCAAAATTGCAGATTTGAAGAGGCATGTGGAATTCCTTGTGGC
TGAGAATGAAAGATTAAGGAAAGAAAATAAACAACTAAAGGCTGAAAAGGCCAGACTTCTAAAAGGTCCAATAGAAAAGG
AGCTGGATGTAGATGCTGATTTTGTAGAAACGTCAGAGTTATGGAGCTTGCCACCACATTCAGAAACTGCTACAGCCTCC
TCAACCTGGCAGAAGTTCGCAGCAAATACTGGGAAAGCCAAGGACATTCCAATCCCCAATCTTCCTCCCTTGGATTTTCC
ATCTCCAGAACTTCCTCTTATGGAGCTCTCTGAGGATATTCTGAAAGGATTTATGAATAATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 12 .39 RPM |
| SRP007412_cerebellum | 9 .97 RPM |
| SRP007412_heart | 3 .21 RPM |
| SRP007412_kidney | 10 .41 RPM |
| SRP007412_liver | 31 .20 RPM |
| SRP007412_testis | 13 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004648 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000148572 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013016 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000010849 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000017726 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017183 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000075000 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000005856 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002411 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000000641 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000004744 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000011341 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_194 | 94.86 | 74.56 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1780 | 90.24 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2715 | 94.46 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000002539 retrocopies