Parental gene:

ENSSTOG00000011341

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393563.1:1654207..1671782(-)


>ENSSTOG00000011341
ATGGAAGTAATGGAAGCACCTCTCAACCTGGCTCATCAGCAGAGCAGACGAGCAGACCGTTTATTAGCTGCAGGGAAATA
CGAAGAGGCTATTTCTTGTCACAAGAAGGCTGCGGCATATCTTTCTGATGCTATGAAGCTGACCAAGTCTGAGCAGGCTC
ATTTATCACTGGAATTACAAAGGGATAGCCACATGAAACAGCTCCTCCTCATACAGGAGAGGTGGAAAAGGGCAAAGCGA
GAAGAACGATCAAAAGCTCAGAACACAGACAAGGACGTAGCTACCCATCTTCAAGCATCTCACAAACCCTCTGCTGAGGA
AGCAGAGGGCCAGAGTCCCCTTCTTTCTCAGAAGTACAGCCCTTCTACAGAGAAACACCTCCCTGAAATTCAAGGAGTTT
TTGACAGGGATCCAGACACACTACTATTTTTACTTCAGCAAAAGAGTGAGCCAACAGAGCCATGTATTGGAAGCAAAGCC
CCGAAGGATGATAAAACAATTATTGAGGAGCAGGCAACCAAAATTGCAGATTTGAAGAGGCATGTGGAGTTCCTTGTGGC
TGAGAATGAAAGATTAAGGAAAGAAAATAAACAACTAAAGGCTGAAAAAGCCAGACTTCTAAAAGGTCCAGTAGATAAGG
AGCTGGATGTGGATGCTGATTTTGTAGAAAAGTCGGAGTTATGGAGCTTGCCACCACATTCAGACACTGCTACAGCTTCT
TCAACCTGGCAGAAATTTGCAGCAAATACTGGGAAAGCCAAGGATATTCCAATACCCAATCTTCCTCCCTTGGATTTTCC
ATCTCCAGAACTTCCACTTATGGAGCTGTCTGAGGATTTTCTGAAAGGACTTATGAATAATTAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004648 ortholog_one2many 3 retrogenes
retro_chof_1032, retro_chof_2250, retro_chof_2568,
Homo sapiens ENSG00000148572 ortholog_one2many 3 retrogenes
retro_hsap_2643, retro_hsap_3999, retro_hsap_433,
Gorilla gorilla ENSGGOG00000013016 ortholog_one2many 2 retrogenes
retro_ggor_1846, retro_ggor_2685,
Macropus eugenii ENSMEUG00000010849 ortholog_one2many 3 retrogenes
retro_meug_1385, retro_meug_2049, retro_meug_671,
Macaca mulatta ENSMMUG00000017726 ortholog_one2many 1 retrogene
retro_mmul_1523,
Monodelphis domestica ENSMODG00000017183 ortholog_one2many 1 retrogene
retro_mdom_1995,
Mus musculus ENSMUSG00000075000 ortholog_one2many 2 retrogenes
retro_mmus_1278, retro_mmus_1279,
Otolemur garnettii ENSOGAG00000005856 ortholog_one2many 1 retrogene
retro_ogar_2110,
Pongo abelii ENSPPYG00000002411 ortholog_one2many 3 retrogenes
retro_pabe_2327, retro_pabe_3285, retro_pabe_3286,
Pan troglodytes ENSPTRG00000002539 ortholog_one2many 3 retrogenes
retro_ptro_1780, retro_ptro_194, retro_ptro_2715,
Rattus norvegicus ENSRNOG00000000641 ortholog_one2many 2 retrogenes
retro_rnor_1681, retro_rnor_994,
Sarcophilus harrisii ENSSHAG00000004744 ortholog_one2many 1 retrogene
retro_shar_427,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_183 84.44 94.08
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Download FASTA sequences of all ENSSTOG00000011341 retrocopies