Parental gene: | Prdx6, ENSRNOG00000002896 |
| Aliases: | None |
| Description: | Peroxiredoxin-6 [Source:UniProtKB/Swiss-Prot;Acc:O35244] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 13:83972033..83983136(-) |
>ENSRNOG00000002896
ATGCCCGGAGGGCTGCTTCTCGGGGACGAAGCCCCCAACTTTGAGGCCAATACCACCATCGGCCACATCCGCTTCCACGA
TTTCCTAGGAGATTCATGGGGCATTCTCTTTTCCCACCCACGGGACTTTACCCCAGTGTGCACCACAGAACTTGGCAGAG
CTGCAAAGCTGGCGCCAGAGTTTGCCAAGAGGAATGTTAAGTTGATTGCTCTTTCAATAGACTCTGTTGAGGACCATTTT
GCCTGGAGCAAGGACATCAATGCTTACAATGGTGCAGCACCCACAGAAAAGCTACCATTTCCCATCATCGACGATAAGGA
CAGGGACCTTGCCATCCTGTTGGGCATGTTGGATCCAGCAGAGAAGGATGAAAAAGGCATGCCCGTGACAGCCCGTGTGG
TATTCATTTTTGGCCCTGACAAGAAACTAAAACTGTCCATCCTCTACCCAGCCACCACGGGCAGAAACTTTGATGAGATT
CTCAGAGTGGTTGACTCCCTCCAGCTGACAGCATCAAATCCAGTTGCCACTCCAGTTGACTGGAAGAAGGGAGAGAGTGT
GATGGTCCTTCCCACCCTCCCTGAAGAGGAAGCCAAACAACTTTTCCCTAAAGGAGTCTTCACCAAAGAGCTCCCATCTG
GCAAGAAATACCTCCGTTATACGCCCCAGCCTTAA
ATGCCCGGAGGGCTGCTTCTCGGGGACGAAGCCCCCAACTTTGAGGCCAATACCACCATCGGCCACATCCGCTTCCACGA
TTTCCTAGGAGATTCATGGGGCATTCTCTTTTCCCACCCACGGGACTTTACCCCAGTGTGCACCACAGAACTTGGCAGAG
CTGCAAAGCTGGCGCCAGAGTTTGCCAAGAGGAATGTTAAGTTGATTGCTCTTTCAATAGACTCTGTTGAGGACCATTTT
GCCTGGAGCAAGGACATCAATGCTTACAATGGTGCAGCACCCACAGAAAAGCTACCATTTCCCATCATCGACGATAAGGA
CAGGGACCTTGCCATCCTGTTGGGCATGTTGGATCCAGCAGAGAAGGATGAAAAAGGCATGCCCGTGACAGCCCGTGTGG
TATTCATTTTTGGCCCTGACAAGAAACTAAAACTGTCCATCCTCTACCCAGCCACCACGGGCAGAAACTTTGATGAGATT
CTCAGAGTGGTTGACTCCCTCCAGCTGACAGCATCAAATCCAGTTGCCACTCCAGTTGACTGGAAGAAGGGAGAGAGTGT
GATGGTCCTTCCCACCCTCCCTGAAGAGGAAGCCAAACAACTTTTCCCTAAAGGAGTCTTCACCAAAGAGCTCCCATCTG
GCAAGAAATACCTCCGTTATACGCCCCAGCCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 138 .37 RPM |
| SRP017611_kidney | 250 .52 RPM |
| SRP017611_brain | 116 .04 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000015560 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000004855 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000014579 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000011367 | ortholog_one2one | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000009355 | ortholog_one2many | 6 retrogenes | |
| Cavia porcellus | ENSCPOG00000011091 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000022468 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000004040 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000117592 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000026357 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000008776 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000004032 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000004648 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000026701 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000015278 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000042455 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000002596 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000003248 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000010073 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000008478 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_754 | 93.97 | 51.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_806 | 80.19 | 93.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_2084 | 74.57 | 76.79 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000002896 retrocopies