RetrogeneDB ID: | retro_ttru_1274 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_109331:103913..104583(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRDX6 | ||
Ensembl ID: | ENSTTRG00000008478 | ||
Aliases: | None | ||
Description: | peroxiredoxin 6 [Source:HGNC Symbol;Acc:16753] |
Percent Identity: | 89.82 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MPGGLLLGDKAPNFEANTTIGRIRFHDYLGDSXXXXXXXXRDFTPVCTTELGRAA-KLAPEFAKRNVKMI |
MP.GLLLGD.APNFEANTTIG.IRFHDYLGDS........RDFTPVCTTELGRAA.KLAPEFAKRNVKMI | |
Retrocopy | MPRGLLLGDEAPNFEANTTIGCIRFHDYLGDSWSILFSHPRDFTPVCTTELGRAA<KLAPEFAKRNVKMI |
Parental | ALSIDSVEDHLAWSKDINAYNGDEPTEKLPFPIIDDKNRDLAIQLGMLDPAEKDEKGMPVTARVVFVFGP |
ALS.DSVEDHLAWSKDINAYNGDEPTEKLPFPIIDDKN.DLAIQ.GML.PAEKDEKGMPVTA.VVF.FGP | |
Retrocopy | ALSVDSVEDHLAWSKDINAYNGDEPTEKLPFPIIDDKNQDLAIQSGMLYPAEKDEKGMPVTALVVFIFGP |
Parental | DKKLKLSILYPATTGRNFDEILRVIISLQLTAEKRVATPVDWKNGDSVMVLPTIPEEEAK-KIFPKGVFT |
DKKLKLSILYPATTGRNFDEILRVIISLQLTAEKRVATPV.WKNGDSVMVLPTIPEEEAK.K.FPKGVFT | |
Retrocopy | DKKLKLSILYPATTGRNFDEILRVIISLQLTAEKRVATPVYWKNGDSVMVLPTIPEEEAK<KLFPKGVFT |
Parental | -ELPSGKKYLRYTPQP |
.ELPSGKKYL.YTPQP | |
Retrocopy | KELPSGKKYLHYTPQP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |