RetrogeneDB ID: | retro_chof_1143 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_21096:11225..11605(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRDX6 | ||
Ensembl ID: | ENSCHOG00000011367 | ||
Aliases: | None | ||
Description: | peroxiredoxin 6 [Source:HGNC Symbol;Acc:16753] |
Percent Identity: | 62.5 % |
Parental protein coverage: | 56.7 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | DINAYNGDEPTEKLPFPIIDDKNRDLAILLGMLDPAEKDEKGMPVTA-RVVFIFGPDKKLKLSILYPATT |
DI.AYNG..P.E.LPFP.I.D.N.DLAILL...D.AEKD.K.....A...VFIFGPDKKLKLSI...A.T | |
Retrocopy | DIDAYNGETPMETLPFPNISDRNQDLAILLSKMDSAEKDKKSIFLVA<SLVFIFGPDKKLKLSIFSLAPT |
Parental | GRNFDEILRVVISLQLTAEKRVATPVDWQAGGSVMVLPTIPEEEAKRIFPKGVFTKEL |
G..FDEIL..VISL.L.A.K.V..P.DW..G.SVM.LPT..EE.AK..FPK.VFTK.L | |
Retrocopy | GKTFDEILKMVISLLLRAQKKVVIPGDWKDGHSVMILPTNSEEGAKNLFPKEVFTKYL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |