RetrogeneDB ID: | retro_chof_112 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | GeneScaffold_2379:2..337(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RSL24D1 | ||
Ensembl ID: | ENSCHOG00000011799 | ||
Aliases: | None | ||
Description: | ribosomal L24 domain containing 1 [Source:HGNC Symbol;Acc:18479] |
Percent Identity: | 84.96 % |
Parental protein coverage: | 72.26 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | TKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKV |
TKAF.KA.GKELTV.NSFEFE..RNEPVKYQ.ELWNKTIDAMKRV.EIKQK.QAKFIMNRLKKNKELQKV | |
Retrocopy | TKAFQKATGKELTVKNSFEFEEHRNEPVKYQ*ELWNKTIDAMKRVKEIKQKCQAKFIMNRLKKNKELQKV |
Parental | QDIKEVKQNIH-LIRAPLAGKGKQLEEKMVLQLQQDVDMEDIS |
QD.KEVKQN...LI..PLAGKGKQLEEKMV.QLQQ.VDM.DIS | |
Retrocopy | QDTKEVKQNTN<LIWGPLAGKGKQLEEKMVQQLQQNVDMGDIS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |