RetrogeneDB ID: | retro_tsyr_677 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_167246:739..1061(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RSL24D1 | ||
Ensembl ID: | ENSTSYG00000001271 | ||
Aliases: | None | ||
Description: | ribosomal L24 domain containing 1 [Source:HGNC Symbol;Acc:18479] |
Percent Identity: | 60.55 % |
Parental protein coverage: | 65.64 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KAAGKELTVDNSFEFE-KRRNEPVKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQ-KVQDI |
K..G..L..........K.RNEPVKYQR.LWNKTIDAMKRVEEIKQK.QAKFI...LK.NKE.Q.K.... | |
Retrocopy | KCLGAVLSLGETIDVNLKNRNEPVKYQRDLWNKTIDAMKRVEEIKQKCQAKFIRYKLKENKEVQ>KFKTS |
Parental | KEVKQNIHLIRAPLAGKGKQLEEKMVQQLQQDVDMEDVS |
K.....IHLI....AGKG.QLE.K...QLQ.D.DMEDVS | |
Retrocopy | KK-SSKIHLIWTYFAGKGEQLEVKVAWQLQLDMDMEDVS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |