RetrogeneDB ID: | retro_chof_1938 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_427030:561..951(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RSL24D1 | ||
Ensembl ID: | ENSCHOG00000011799 | ||
Aliases: | None | ||
Description: | ribosomal L24 domain containing 1 [Source:HGNC Symbol;Acc:18479] |
Percent Identity: | 91.54 % |
Parental protein coverage: | 83.87 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | VFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKRVE |
VFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQ.ELWNKTIDAMKRVE | |
Retrocopy | VFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQQELWNKTIDAMKRVE |
Parental | EIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAGKGKQLEEKMVLQLQQDV |
EIKQKRQAKFIMNR....KEL.KVQD.KEVKQNI.LIRAPLAGKGK.LE.KMVL.LQQDV | |
Retrocopy | EIKQKRQAKFIMNRXXXXKEL*KVQDLKEVKQNICLIRAPLAGKGKHLELKMVLHLQQDV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |