RetrogeneDB ID: | retro_chof_739 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_142348:523..779(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | POMP | ||
Ensembl ID: | ENSCHOG00000012807 | ||
Aliases: | None | ||
Description: | proteasome maturation protein [Source:HGNC Symbol;Acc:20330] |
Percent Identity: | 78.89 % |
Parental protein coverage: | 62.14 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | NARGLGSQLKDSIPVTELS-ASGPFESQDLLRRGFPCVK-NELLPSHPLELSEKNFQLNQDKMNFSTLRN |
NARGL.SQLK..I.VT.L..ASG...S.DLL..GFPCVK.NELLPSHPLE.SEKNFQLNQDKMNFSTLRN | |
Retrocopy | NARGLASQLKHRILVTDLL>ASG--SSEDLLWEGFPCVK>NELLPSHPLEFSEKNFQLNQDKMNFSTLRN |
Parental | IQGLFAPLKLQM-EFKAVQQ |
IQGL.APLK.Q..EFKAVQQ | |
Retrocopy | IQGLSAPLKFQT<EFKAVQQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |