RetrogeneDB ID: | retro_chof_924 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_169327:567..821(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | POMP | ||
Ensembl ID: | ENSCHOG00000012807 | ||
Aliases: | None | ||
Description: | proteasome maturation protein [Source:HGNC Symbol;Acc:20330] |
Percent Identity: | 79.07 % |
Parental protein coverage: | 60.71 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | RGLGSQLKDSIPVTELSASGPFESQDLLRRGFPCVKNELLPSHPLELSEKNFQLNQDKMN-FSTLRNIQG |
.G...QLK.SIP.TELSASGPFESQDLLRR.FPCVKNEL..SH.LE.SEKN..LNQDKMN.FSTLRNIQ. | |
Retrocopy | QGIRAQLKNSIPGTELSASGPFESQDLLRR*FPCVKNELMRSHLLEFSEKNV*LNQDKMN<FSTLRNIQD |
Parental | LFAPLKLQMEFKAVQQ |
LFAPLKLQ.E.KA.QQ | |
Retrocopy | LFAPLKLQVELKAGQQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |