RetrogeneDB ID: | retro_etel_1240 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_234008:9315..9792(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000013021 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000015057 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 94.97 % |
Parental protein coverage: | 74.65 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAPSRNGMILKPHFHKDWQRRVSTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKV |
MAPSRNGMILKPHFHKD.QR.VSTWFNQ..RKIRR.KARQAKARRIAPRP.SGPIRPIVRCPTVRYHTKV | |
Retrocopy | MAPSRNGMILKPHFHKD*QRHVSTWFNQTVRKIRRLKARQAKARRIAPRPLSGPIRPIVRCPTVRYHTKV |
Parental | RAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSS |
RAGRGFSLEELRVAGIHKKVAR.IGISVDPRRRNKSTESLQA.VQRLKEYRSKLILFPRKPSAPKKGDSS | |
Retrocopy | RAGRGFSLEELRVAGIHKKVARAIGISVDPRRRNKSTESLQAKVQRLKEYRSKLILFPRKPSAPKKGDSS |
Parental | AEELKLATQLTGPVMPIRN |
AEELKLATQLTGPVMPIRN | |
Retrocopy | AEELKLATQLTGPVMPIRN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |